Marius Trollmann
@m-a-r-i-u-s.bsky.social
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📥 72
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pinned post!
🔔🔔🔔 We’ve updated our article “Decoding pH-Driven Phase Transition of Lipid Nanoparticles” on bioRxiv! The cpHMD simulations now cover longer timescales, and we added new simulations with the molecule TNS. Could it modulate the surface charge? Read the full story:
www.biorxiv.org/content/10.1...
about 1 month ago
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I was pleasured to present our latest Research on titratable aminolipids at the 3rd NHR conference! 😊
#HPC
#science
#simulations
#phd
3 days ago
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reposted by
Marius Trollmann
Annika Brockschmidt
9 days ago
Ich habe über Charlie Kirks Geschäftsmodell, sein politisches Projekt und seine Radikalisierung zum rechtsextremen Aktivisten geschrieben. Mit Einordnungen und Erläuterungen von
@matthewboedy.bsky.social
,
@bradleyonishi.bsky.social
und
@unddieregel.bsky.social
www.volksverpetzer.de/analyse/haya...
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Dunja Hayali hat Recht: So rechtsextrem & menschenfeindlich war Charlie Kirk
Dunja Hayali wird massiv bedroht, weil sie die Aussagen von Charlie Kirk völlig richtig als rassistisch, sexistisch und menschenfeindlich bezeichnete. Annika Brockschmidt analysiert die Ansichten des ...
https://www.volksverpetzer.de/analyse/hayali-recht-rechtsextrem-charlie-kirk/?utm_source=bsky
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reposted by
Marius Trollmann
Böckmann Lab
10 days ago
Great start of our AMPEL meeting
@fau.de
@m-a-r-i-u-s.bsky.social
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reposted by
Marius Trollmann
Böckmann Lab
14 days ago
An Editor of some high-impact Journal asking for data from a mouse model - in an all-atom simulation study… Our answer:
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reposted by
Marius Trollmann
Böckmann Lab
21 days ago
Wir suchen Dich! Die AG Computational Biology
@fau.de
sucht ab Jan 2026 eine Teamassistenz (m/w/d, 50% TV-L E 8). Organisation, Verwaltung & Kommunikation sind dein Ding? Dann bewirb dich bis 16.09.2025! 👉 Mehr Infos:
www.jobs.fau.de/jobs/teamass...
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Teamassistenz für die Arbeitsgruppe Computational Biology (m/w/d)
https://www.jobs.fau.de/jobs/teamassistenz-fuer-die-arbeitsgruppe-computational-biology-m-w-d-fau-1241/
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reposted by
Marius Trollmann
Böckmann Lab
21 days ago
We're hiring! Join our team at
@fau.de
! We are seeking an enthusiastic candidate for a PhD position in our lab specializing in cutting-edge theoretical and computational membrane biophysics. Please send your CV, and a statement of research interests via email.
www.biomemphys.nat.fau.de/jobs/
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reposted by
Marius Trollmann
Böckmann Lab
20 days ago
Die Vorbereitungen zur Langen Nacht der Wissenschaften am 25. Oktober laufen an…
#LNdW2025
@fau.de
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reposted by
Marius Trollmann
Ruprecht Polenz
27 days ago
Unfortunately, not everyone who needs these treatments takes advantage of them
#Trump
#Vance
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🔔 Excited to share our latest work on the dynamics of synthetic glycolipids in model membranes! 🤩
@biomemphys.bsky.social
! Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy | Journal of the American Chemical Society
pubs.acs.org/doi/full/10....
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Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy
Over recent decades, the glycocalyx, an extracellular organelle composed of a multitude of glycolipids, glycoproteins, proteoglycans, and glycoRNA, has gained considerable interest in cellular biology. While research in this field has revealed its tremendous importance in ever more aspects of physiological and pathological cellular processes, many of the principles that govern the role of the glycocalyx in these processes on a molecular level are still unknown. In order to unravel the fundamental laws underlying glycocalyx function, new technologies are required that enable the distinction between individual subprocesses within the intricate environment of the glycocalyx. Here, we establish an experimental platform to investigate the dynamics of the glycocalyx at the nanometer and microsecond length and time scales in a bottom-up fashion. We synthesized defined oligosaccharides and installed them on supported lipid bilayers. This way, synthetic glycolipids were assembled to glycocalyx model systems with tunable properties. By investigating these tunable model systems with interferometric scattering (iSCAT) microscopy, we gain access to the required spatiotemporal resolution. We found a strong correlation between the molecular structure of several investigated model glycans and global dynamics of the system. Our findings are corroborated by atomistic molecular dynamics simulations and coarse-grained Brownian dynamics simulations. Our results provide the first direct experimental evidence on the relationship between glycan structure, organization, and dynamics, offering a robust and versatile basis for a quantitative understanding of glycocalyx biology and physics at the molecular level.
https://pubs.acs.org/doi/full/10.1021/jacs.5c08659
28 days ago
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🔔🔔🔔 We’ve updated our article “Decoding pH-Driven Phase Transition of Lipid Nanoparticles” on bioRxiv! The cpHMD simulations now cover longer timescales, and we added new simulations with the molecule TNS. Could it modulate the surface charge? Read the full story:
www.biorxiv.org/content/10.1...
about 1 month ago
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reposted by
Marius Trollmann
Böckmann Lab
3 months ago
@biomemphys.bsky.social
lab at
#EBSA2025
in Rome! Happy to discuss recent work on membranes and LNPs at Posters and in Talk!
@m-a-r-i-u-s.bsky.social
@fau.de
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reposted by
Marius Trollmann
Böckmann Lab
3 months ago
🚨 New Publication Alert! 🚨 Our latest review on antimicrobial peptides (AMPs) is now out in Small! 🧬✨ We cover different mechanisms of action of AMPs with a focus on the targeting of bacterial membranes.
@fau.de
@m-a-r-i-u-s.bsky.social
Check it out here:
doi.org/10.1002/smll...
#AMP
#membranes
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From Membrane Composition to Antimicrobial Strategies: Experimental and Computational Approaches to AMP Design and Selectivity
Antimicrobial peptides (AMPs) are promising candidates for next-generation antibiotics, acting through mechanisms such as membrane disruption and intracellular targeting. This review examines how var....
https://doi.org/10.1002/smll.202411476
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reposted by
Marius Trollmann
Böckmann Lab
3 months ago
How many theoreticians do you need to unmount a kitchen?
@fau.de
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reposted by
Marius Trollmann
Böckmann Lab
7 months ago
New study alert, published in PNAS! Our team revisits lipid nanoparticle composition and structure, challenging coarse-grained simulation approaches that may mask crucial pH-driven phase transitions. Discover how setups may bias LNP structures
#LNP
@fau.de
www.pnas.org/doi/10.1073/pnas.2422995122
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reposted by
Marius Trollmann
Florian Aigner
8 months ago
Ich habe zusammen mit ChatGPT ein Sonett über die Bedrohung der Demokratie durch Tech-Bros geschrieben. Und jetzt weiß ich auch nicht mehr, was ich denken soll.
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
👉 Please have a look at the accompanying paper too!
biorxiv.org/cgi/content/...
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Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functionality largely governed by aminolipids. At low pH, protonated aminolipids facilitate efficient mRNA...
https://biorxiv.org/cgi/content/short/2024.11.27.625717v1
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🚨 Preprint Alert! 🚨 Check out our new book chapter on Constant-pH MD Simulations of Lipids! Learn how to use CpHMD simulations to study pH-dependent behavior of aminolipids in lipid nanoparticles for drug delivery. 💊🧬
#membranes
#LNP
@m-a-r-i-u-s.bsky.social
@fau.de
biorxiv.org/cgi/content/...
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reposted by
Marius Trollmann
bioRxiv Biophysics
10 months ago
Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles https://www.biorxiv.org/content/10.1101/2024.11.27.625717v1
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Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles https://www.biorxiv.org/content/10.1101/2024.11.27.625717v1
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functi
https://www.biorxiv.org/content/10.1101/2024.11.27.625717v1
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
Details at
www.biomemphys.nat.fau.de/jobs/
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Jobs
Posted on 25.11.2024 We are seeking enthusiastic candidates for Ph.D. positions in our lab specializing in cutting-edge theoretical and computational membrane biophysics. Our research delves into the…
https://www.biomemphys.nat.fau.de/jobs/
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🌟 Ph.D./Postdoc in Computational Membrane Biophysics 🌟 Join our team at @unifau.bsky.social to study Lugdunin, a unique antimicrobial peptide, using cutting-edge simulations. Collaborate with experts, access top-tier HPC, and advance antimicrobial science. 📩 Apply:
[email protected]
#membranes
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🔑 Topics include: • Membrane-targeting strategies of AMPs • Composition, structure, and dynamics of bacterial membranes versus eukaryotic membranes • AMPs design and discovery: From natural peptides to therapeutics
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🚨 Review Preprint Alert 🚨 Discover how computational and experimental tools are employed in antimicrobial peptide (AMP) research for combating bacteria. Great Collaboration with Eggeling and Gutsmann Labs Read now on chemRxiv
#AntimicrobialPeptides
#membranes
@fau.de
chemrxiv.org/engage/chemr...
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🚨 Preprint Alert 🚨pH-induced phase transitions in lipid nanoparticle (LNP) formulations are crucial for LNP function – but not all settings in MD simulations allow to observe these transitions...
#membranes
#LNP
@fau.de
arxiv.org/abs/2412.02731
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
Preprint alert! 🚨 "To be protonated or not to be protonated? That is the question! 🤔 In our latest study, we used constant-pH simulations to uncover the dynamic (de)protonation of ionizable aminolipids in Lipid Nanoparticles (LNPs).
#membranes
@fau.de
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
🧪 With hundreds of titratable sites, we explored how these key components behave in the BioNTech & Pfizer LNP formulation. Our findings reveal a fascinating pKa shift by more than 3 units and resolve a position-dependent protonation of aminolipids.
biorxiv.org/cgi/content/...
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Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functionality largely governed by aminolipids. At low pH, protonated aminolipids facilitate efficient mRNA...
https://biorxiv.org/cgi/content/short/2024.11.27.625717v1
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reposted by
Marius Trollmann
Böckmann Lab
10 months ago
Very grateful for research funding granted by
#DFG
to study antimicrobial peptide Lugdunin's selectivity for gram-positive bacteria. Thrilled to continue collaboration with Steinem Lab, Göttingen. Insights could pave the way for new strategies against resistant infections. @UniFAU
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Marius Trollmann
Brady Johnston
11 months ago
Manged to get NVIDIA's GPU physics solver Warp running interactively inside of Blender. This is 500,000 particles simulating ON THE GPU and taking live inputs from the viewport
#b3d
#GeometryNodes
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Marius Trollmann
Böckmann Lab
almost 2 years ago
🌟 Matthias Pöhnl & @MTrollmann reveal cholesterol's paradox in membranes: it both thickens and softens. Insights into this balancing act of rigidity and flexibility in Nat. Comm
#FAU
#membranes
www.nature.com/articles/s41...
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Nonuniversal impact of cholesterol on membranes mobility, curvature sensing and elasticity - Nature ...
Cholesterol both thickens and condenses membranes, yet it also softens them under certain conditions. Here, authors uncover cholesterol’s dual role in the delicate balance of rigidity and flexibilit...
https://www.nature.com/articles/s41467-023-43892-x
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