bioRxiv Biophysics
@biorxiv-biophys.bsky.social
📤 3161
📥 0
📝 4907
Cryo-EM reveals the structural basis of subtype-specific, noncompetitive inhibition of the human P2X3 receptor
https://www.biorxiv.org/content/10.64898/2026.01.03.697462v1
about 16 hours ago
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LignAmb25: A Comprehensive AMBER Force Field Addressing Lignin's Structural and Chemical Diversity
https://www.biorxiv.org/content/10.64898/2026.01.03.697499v1
about 17 hours ago
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3
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Impact of competition between precursor and mature microRNAs on stochastic gene expression
https://www.biorxiv.org/content/10.64898/2026.01.03.697472v1
about 17 hours ago
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1
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Conformational changes upon pore blocker removal reveal conductive states of TMEM16A
https://www.biorxiv.org/content/10.64898/2026.01.02.697443v1
1 day ago
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A moments-based approach for inferring mechanisms of transcriptional regulation using nascent RNA data
https://www.biorxiv.org/content/10.64898/2026.01.03.697452v1
1 day ago
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Nanodisc-Mediated Visualization of Crowding-Induced Condensation and Membrane Reorganization in Two-Dimensional Membrane Environments
https://www.biorxiv.org/content/10.64898/2026.01.02.697448v1
1 day ago
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1
1
PUFA modulation of ASIC3 involves both specific and lipid solvent-like interactions
https://www.biorxiv.org/content/10.64898/2026.01.02.697424v1
1 day ago
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3
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CholBindNet: Interpretable Neural Networks for Cholesterol Binding Site Prediction
https://www.biorxiv.org/content/10.64898/2026.01.02.697429v1
1 day ago
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1
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A variational method for efficient estimation of diffusion and free-energy profiles along collective variables
https://www.biorxiv.org/content/10.64898/2026.01.01.697292v1
2 days ago
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4
2
Sequence-Only Prediction of Antibody Fab Thermostability Using Protein Language Model Embeddings
https://www.biorxiv.org/content/10.64898/2025.12.30.697053v1
2 days ago
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Memory from variability: Heritable short-term cellular memory emerges from stochastic biochemical reaction networks
https://www.biorxiv.org/content/10.64898/2025.12.31.694479v1
3 days ago
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4
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Fluorescent peptides for membrane tension and domain structure reporting
https://www.biorxiv.org/content/10.64898/2025.12.30.697119v1
4 days ago
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1
2
Sloppiness and Action Confinement in Cell State Transitions: Are Single Cells Sloppy?
https://www.biorxiv.org/content/10.64898/2025.12.31.697145v1
4 days ago
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A systematic approach for the purification of fluorophore-labelled proteins via anion exchange chromatography
https://www.biorxiv.org/content/10.64898/2025.12.30.697019v1
5 days ago
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1
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Template-based RNA structure prediction advanced through a blind code competition
https://www.biorxiv.org/content/10.64898/2025.12.30.696949v1
5 days ago
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1
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Structural basis for hydrolytic splicing of a circularly permuted group II intron
https://www.biorxiv.org/content/10.64898/2025.12.30.696962v1
5 days ago
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1
1
Single-molecule behavior and cell-growth regulation in human RTKs
https://www.biorxiv.org/content/10.64898/2025.12.29.696957v1
5 days ago
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1
1
Viscoelasticity and interface properties of multi-component condensates govern protein sequestration and suppression of amyloid formation
https://www.biorxiv.org/content/10.64898/2025.12.29.695806v1
6 days ago
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2
1
A Generative Foundation Model for Cryo-EM Densities
https://www.biorxiv.org/content/10.64898/2025.12.29.696802v1
6 days ago
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1
1
Evolution of the ribosomal exit tunnel through the eyes of the nascent chain
https://www.biorxiv.org/content/10.64898/2025.12.25.696519v1
6 days ago
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2
1
Structural basis for non-AUG translation regulation by 5MPs
https://www.biorxiv.org/content/10.64898/2025.12.28.696766v1
6 days ago
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2
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A thermodynamic chromatin polymer model characterizes the epigenetic conditions for Hox collinearity.
https://www.biorxiv.org/content/10.64898/2025.12.28.696739v1
7 days ago
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Large scale prospective evaluation of co-folding across 557 Mac1-ligand complexes and three virtual screens
https://www.biorxiv.org/content/10.64898/2025.12.25.696505v1
7 days ago
0
3
3
Cell-in-Water: measurements using Optical Photothermal Infrared spectroscopy
https://www.biorxiv.org/content/10.64898/2025.12.28.696748v1
7 days ago
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Angle-resolved Measurements Reveal the Origin of Signal Anisotropy in Pump-probe Microscopy
https://www.biorxiv.org/content/10.64898/2025.12.27.691690v1
8 days ago
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Epigenetic state encodes locus-specific chromatin mechanics
https://www.biorxiv.org/content/10.64898/2025.12.27.696709v1
8 days ago
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To Predict is to Design: Unlocking Generative Capabilities in All-Atom Structure Predictors via Geometric Score Distillation
https://www.biorxiv.org/content/10.64898/2025.12.23.696242v1
9 days ago
0
2
1
From Dimerization to Signaling: Molecular Dynamics Insights into EphA1 and EphA2 Isoform Specificity
https://www.biorxiv.org/content/10.64898/2025.12.23.696317v1
10 days ago
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1
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Intrinsic conformational equilibria position arrestin-2 for activation
https://www.biorxiv.org/content/10.64898/2025.12.24.696424v1
10 days ago
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1
1
Sizing single trapped nanoparticles with interferometric scattering fluctuations
https://www.biorxiv.org/content/10.64898/2025.12.23.696206v1
10 days ago
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1
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Conformational and Environmental Determinants of RNA Solvation Dynamics: Roles of Intrinsic Flexibility, Allostery, and Protein Binding
https://www.biorxiv.org/content/10.64898/2025.12.24.696429v1
10 days ago
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1
1
Screening and structural characterization of a nanobody targeting the thermostable green fluorescent protein
https://www.biorxiv.org/content/10.64898/2025.12.23.696179v1
10 days ago
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Sequence Complexity Dictates Polymer Mixing
https://www.biorxiv.org/content/10.64898/2025.12.23.696237v1
10 days ago
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1
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How medically important antimicrobials bind to the 30S ribosomal subunit in a bacterial pathogen
https://www.biorxiv.org/content/10.64898/2025.12.24.696192v1
10 days ago
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Single-cell chiral symmetry breaking under confinement
https://www.biorxiv.org/content/10.64898/2025.12.23.696323v1
10 days ago
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2
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Two-colour Imaging Fluorescence Correlation Spectroscopy (ImFCS) probes the influence of the juxta-membrane actin-cortex
https://www.biorxiv.org/content/10.64898/2025.12.24.696335v1
10 days ago
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Residue-Specific Modulation of Aggregation-Associated Interactions bySpermine in Tau, α-Synuclein, and Aβ40
https://www.biorxiv.org/content/10.64898/2025.12.23.696224v1
10 days ago
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1
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Metal-Triggered Rheological Switching in Engineered Lanmodulin Condensates
https://www.biorxiv.org/content/10.64898/2025.12.22.696036v1
11 days ago
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Integrating NMR restraints into coarse-grained simulations: toward accurate conformational ensembles of complex protein systems
https://www.biorxiv.org/content/10.64898/2025.12.22.695971v1
11 days ago
0
3
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Spatio-temporal resource landscapes govern the confinement and escape of therapy-resistant mutants in structured populations
https://www.biorxiv.org/content/10.64898/2025.12.22.695823v1
11 days ago
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Enhancing the imaging rate of high-speed atomic force microscopy using a combination of multiple techniques
https://www.biorxiv.org/content/10.64898/2025.12.22.695957v1
11 days ago
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Mechanistic Interpretability of Fine-Tuned Protein Language Models for Nanobody Thermostability Prediction
https://www.biorxiv.org/content/10.64898/2025.12.22.695878v1
11 days ago
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Evidence for the Progressive Improvement of All-Atom Force Fields in Reproducing Local Conformational Preferences of Flexible Peptides
https://www.biorxiv.org/content/10.64898/2025.12.22.695171v1
11 days ago
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1
A food chain of ribozymes built on an ancestral strand
https://www.biorxiv.org/content/10.64898/2025.12.22.695801v1
12 days ago
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The Structural Basis for RNA Binding and Recognition of the Disordered Prion-Like Domain of TDP-43
https://www.biorxiv.org/content/10.64898/2025.12.22.695782v1
12 days ago
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Molecular interactions underlying selective partitioning of clients into MED1 and FUS condensates
https://www.biorxiv.org/content/10.64898/2025.12.23.696191v1
12 days ago
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Dynamic domain interactions encode possible CheA autophosphorylation mechanisms revealed by coarse-grained simulations
https://www.biorxiv.org/content/10.64898/2025.12.21.695815v1
12 days ago
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Quantum Computing Reveals Energetics of Tau Peptide Fragments
https://www.biorxiv.org/content/10.64898/2025.12.21.695828v1
12 days ago
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Backbone Hydrogen Bonding as a Determinant of Condensate Material States
https://www.biorxiv.org/content/10.64898/2025.12.21.695814v1
12 days ago
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Characterizing the Impact of Nucleoid-Associated Proteins on HU-DNA Interactions by Live-Cell Single-Molecule Tracking
https://www.biorxiv.org/content/10.64898/2025.12.19.695591v1
12 days ago
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1
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