A. Berçin Barlas
@aysebercinb.bsky.social
📤 39
📥 64
📝 5
Postdoctoral Researcher @Izmir Biomedicine and Genome Center - Computational Structural Biology Lab.
reposted by
A. Berçin Barlas
BioExcel CoE
2 months ago
Our rescheduled webinar "DynaPIN: a tool for characterising dynamic protein interfaces" is happening tomorrow! 🗓️ 28 April 2026, 15:00 CET ✍️
bioexcel.eu/lgmq
@ezgikaraca.bsky.social
#webinar
#ComputerSimulation
#protein
#molecularmodeling
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Webinar: DynaPIN: A Tool for Characterizing Dynamic Protein Interfaces (2026-04-28)
Date: 28 April 2026 Time: 15:00 CET Registration Abstract Static structural models often fail to capture the dynamic mechanisms of protein interactions. To address this, we introduce DynaPIN, an open...
https://bioexcel.eu/lgmq
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reposted by
A. Berçin Barlas
Ezgi Karaca
3 months ago
Only a couple of days left to introduce our brand new tool, DynaPIN that
@aysebercinb.bsky.social
developed (in collaboration with
@sacquin-mo.bsky.social
& co.) to analyze dynamic/ensemble protein interfaces!
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reposted by
A. Berçin Barlas
Büşra Savaş
5 months ago
🚀 Excited to announce that our perspective piece with
@ezgikaraca.bsky.social
and
@aysebercinb.bsky.social
on AlphaFold distograms is now published in
@febsletters.bsky.social
!! Here is what we did further 👇
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reposted by
A. Berçin Barlas
Büşra Savaş
7 months ago
364 days a year we use AlphaFold to predict protein structure… But not on Christmas Eve! That’s when Santa does the predictions. But beware, computational structural biologists on the naughty list will only get low pLDDTs
#SantaFold
#bananapro
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reposted by
A. Berçin Barlas
Ezgi Karaca
9 months ago
And the legacy continues! 😊
@amjjbonvin.bsky.social
@bioinfo.se
@lindorfflarsen.bsky.social
#EMBOIntegMod25
! 🍀🧿
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🚀 Excited to share that our article with
@ezgikaraca.bsky.social
is now published in Communications Biology! In this study, we explored DNA readout rules of almost identical DNMT3A and DNMT3B (91% sequence similarity!), and we asked: how can nearly the same proteins “see” DNA so differently? 🧬✨
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11 months ago
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