Xinya Pan
@xinyapan.bsky.social
📤 54
📥 79
📝 1
Fascinated by plant-endophyte interactions under biotic stress🌱
reposted by
Xinya Pan
NL Institute of Ecology NIOO-KNAW
5 days ago
New publication: Disentangling the molecular mechanisms of disease suppression by endophytic
#Flavobacterium
sp. 98, by
@xinyapan.bsky.social
@gillesvanwezel.bsky.social
@raaijmakersjm.bsky.social
and others.
#plantmicrobiome
#plantgrowth
doi.org/10.1016/j.mi...
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reposted by
Xinya Pan
Mitja M. Zdouc
13 days ago
Have you ever used a
#bioinformatics
#database
and were frustrated by its lack of coverage? Did you ever think about starting your own resource? We just published a new strategy for community-driven
#biocuration
, based on our experiences with the
#MIBiG
database (1/8)!
doi.org/10.1093/bib/...
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Strategies for community-sourced biocuration in bioinformatics: a case study on MIBiG 4.0
Abstract. Biocuration is essential to transform molecular sequence data into standardized, machine-readable resources. Such curated datasets enable compara
https://doi.org/10.1093/bib/bbaf659
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🌱✨ Excited to see my PhD chapters come alive as peer-reviewed papers Endophytic Flavobacterium in action: Fighting root fungal disease →
doi.org/10.1016/j.mi...
Thriving in low-oxygen roots →
doi.org/10.1093/isme...
@raaijmakersjm.bsky.social
@vcarryon.bsky.social
13 days ago
1
8
4
reposted by
Xinya Pan
Ian Lidbury
14 days ago
academic.oup.com/ismej/advanc...
Endophytic adaptation in Flavobacterium sp. 98
@xinyapan.bsky.social
@vcarryon.bsky.social
@gillesvanwezel.bsky.social
✌🏽 lysoPE story could be cool
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Hypoxia Induces Phenotypic and Metabolic Shifts in Endophytic Flavobacterium sp. 98
Abstract. Oxygen plays a crucial role in shaping microbial physiology, functions, and behavior. Endophytic bacteria, residing within plant tissues, inhabit
https://academic.oup.com/ismej/advance-article/doi/10.1093/ismejo/wraf269/8373285
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reposted by
Xinya Pan
MicroSOS
about 2 months ago
#PMS2025
is a great occasion for many members of the MicroSOS consortium to meet and discuss about the project’s current and future activities!
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reposted by
Xinya Pan
MicroSOS
about 2 months ago
Final countdown before the start of the
#PMS2025
!!! 🪴 Looking forward to seeing you in Antequera (Malaga) on 3-7 November! Final program at:
6thplantmicrobiomesymposium2025.com/programme/
#Plantscience
#MicrobiomeResearch
#Bioinformatics
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reposted by
Xinya Pan
MicroSOS
4 months ago
#PMS2025
is going global! 🌍 So far, participants from 32 countries have registered for
#PMS2025
This is your chance to connect, share ideas, and network with a international community of
#plantmicrobiome
scientists. 📅 Join now @
6thplantmicrobiomesymposium2025.com
#MicrobiomeResearch
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reposted by
Xinya Pan
Mitja M. Zdouc
about 1 year ago
Are you working on natural products? We’ve just released version 4.0 of the MIBiG data standard and repository! It now includes 3059 biosynthetic gene clusters, thanks to the combined efforts of 288 expert contributors. A thread: (1/8)
academic.oup.com/nar/advance-...
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MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration
Abstract. Specialized or secondary metabolites are small molecules of biological origin, often showing potent biological activities with applications in ag
https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkae1115/7919508?searchresult=1
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reposted by
Xinya Pan
MicroSOS
about 1 year ago
🚨 Exciting News! The 6th Plant Microbiome Symposium
6thplantmicrobiomesymposium2025.com
will be organized next year, as part of MicroSOS Project!
#PMS2025
📅 [3-7 November 2025] 📍 [Antequera, Spain,
maps.app.goo.gl/mYYDqS7zeJZG...
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