Susan Gregurick
@sgregurick.bsky.social
📤 130
📥 63
📝 141
I’m the Associate Director for Data Science at the NIH. All views, posts, and retweets are my own.
www.ahajournals.org/doi/10.1161/...
. Study finds ACE2 is causally protective for hypertension and diabetes. This suggests that ACE2 treatment may provide additional protection from these cardiovascular diseases.🧪
loading . . .
Circulating Cardiovascular Proteomic Associations With Genetics and Disease | Circulation: Genomic and Precision Medicine
BACKGROUND: The analysis of the circulating proteome can identify translational modifiers and biomarkers of disease expressivity and severity at a given time point. Here, we explore the relationships ...
https://www.ahajournals.org/doi/10.1161/CIRCGEN.124.005005
about 7 hours ago
0
4
0
www.frontiersin.org/journals/nut...
. Really interesting review. 🧪
loading . . .
Frontiers | Immunomodulatory role of vitamin D and emerging immunotherapies in hepatocellular carcinoma
Hepatocellular carcinoma (HCC) is one of the most common cancers globally, with nearly 1 million new cases diagnosed annually. It is a complex disease, with ...
https://www.frontiersin.org/journals/nutrition/articles/10.3389/fnut.2025.1611829/full
5 days ago
0
5
2
onlinelibrary.wiley.com/doi/10.1002/...
. Nice study on a mobile health app for Chronic low back pain treatment 🧪
loading . . .
Mobile Health (mHealth) for Chronic Low Back Pain Assessment: Design, Development, and Usability Evaluation
This study introduces a mobile health (mHealth) system for chronic low back pain (cLBP) assessment, involving in-clinic and at-home apps to collect comprehensive data from 1000 individuals. Usability....
https://onlinelibrary.wiley.com/doi/10.1002/jsp2.70118
5 days ago
0
3
0
www.jacc.org/doi/10.1016/...
. Import results “the evidence linking inflammation with atherosclerotic CVD is no longer exploratory but is compelling and clinically actionable.” 🧪
loading . . .
Inflammation and Cardiovascular Disease: 2025 ACC Scientific Statement: A Report of the American College of Cardiology
https://www.jacc.org/doi/10.1016/j.jacc.2025.08.047
8 days ago
0
2
1
Allergen Chip Challenge: a nationwide open database supporting allergy prediction algorithms - Journal of Allergy and Clinical Immunology
www.jacionline.org/article/S009...
. nationwide, open database of allergen chip, demographic and clinical information
loading . . .
Allergen Chip Challenge: a nationwide open database supporting allergy prediction algorithms
Graphical abstract: 1
https://www.jacionline.org/article/S0091-6749%2825%2900981-9/fulltext
9 days ago
0
0
0
iopscience.iop.org/article/10.3...
🧪. Very exciting article on exoplanetary atmospheres
27 days ago
0
0
0
www.nature.com/articles/s41...
🧪. Large study of over 1m quantifies the independent associations of albuminuria and eGFR with the incidence of overall cancer, and among selected site-specific cancers, using data from eligible cohorts in the Chronic Kidney Disease Prognosis Consortium (CKD-PC).
loading . . .
Chronic kidney disease and incident cancer risk: an individual participant data meta-analysis - British Journal of Cancer
British Journal of Cancer - Chronic kidney disease and incident cancer risk: an individual participant data meta-analysis
https://www.nature.com/articles/s41416-025-03140-z
about 1 month ago
0
5
1
www.cell.com/biophysj/abs...
. 🧪 nice work from Jeremey smith at ORNL discuss the role of MD and ML/AI to overcome lignocellulose recalcitrance by designing pretreatment methods to efficiently produce solubilized cellulose/lignin/hemicellulose, and improve energy-intensive manufacturing challenges.
loading . . .
Molecular Simulation and Artificial Intelligence for the Circular Economy of Bioenergy and Bioproducts
The concept of the circular bioeconomy is a carbon neutral, sustainable system with zero waste. One vision for such an economy is based upon lignocellulosic biomass. This lignocellulosic circular bioe...
https://www.cell.com/biophysj/abstract/S0006-3495(25)00570-3?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0006349525005703%3Fshowall%3Dtrue
about 1 month ago
0
1
1
www.nature.com/articles/s41...
🧪. this study provides evidence indicating S. mutans can colonize the gut and affect PD pathology via microbial UrdA and its metabolite, imidazole propionate.
loading . . .
Gut microbial production of imidazole propionate drives Parkinson’s pathologies - Nature Communications
Here, the authors show that the oral microbe Streptococcus mutans, elevated in the gut microbiome of Parkinson’s patients, produces imidazole propionate via UrdA that in mice reaches the brain and tri...
https://www.nature.com/articles/s41467-025-63473-4
about 1 month ago
0
3
4
reposted by
Susan Gregurick
Shicheng Guo
about 1 month ago
Study reveals 90%^+ agreement between real-world amyloid-PET visual reads and quantification, aiding cognitive impairment diagnosis! 🧠 PMID:40720133, JAMA Neurol 2025, @JAMANeuro
https://doi.org/10.1001/jamaneurol.2025.2218
#Medsky
#Pharmsky
#RNA
#ASHG
#ESHG
🧪
loading . . .
https://doi.org/10.1001/jamaneurol.2025.2218
No description available
https://doi.org/10.1001/jamaneurol.2025.2218
1
1
1
🧪
add a skeleton here at some point
about 1 month ago
0
0
0
reposted by
Susan Gregurick
link.springer.com/article/10.1...
Neat study finds that cholesterol metabolism was clearly altered in the TDP-43 proteinopathies of effected brains, pointing towards an accumulation of cholesterol esters and triglycerides in the form of lipid droplets
loading . . .
TDP-43 dysregulation impairs cholesterol metabolism linked with myelination defects - Acta Neuropathologica
TDP-43 is a nuclear protein encoded by the TARDBP gene, which forms pathological aggregates in various neurodegenerative diseases, collectively known as TDP-43 proteinopathies, including amyotrophic l...
https://link.springer.com/article/10.1007/s00401-025-02927-x
about 1 month ago
0
0
2
link.springer.com/article/10.1...
Neat study finds that cholesterol metabolism was clearly altered in the TDP-43 proteinopathies of effected brains, pointing towards an accumulation of cholesterol esters and triglycerides in the form of lipid droplets
loading . . .
TDP-43 dysregulation impairs cholesterol metabolism linked with myelination defects - Acta Neuropathologica
TDP-43 is a nuclear protein encoded by the TARDBP gene, which forms pathological aggregates in various neurodegenerative diseases, collectively known as TDP-43 proteinopathies, including amyotrophic l...
https://link.springer.com/article/10.1007/s00401-025-02927-x
about 1 month ago
0
0
2
reposted by
Susan Gregurick
PLOS Biology
about 1 month ago
What causes viral transmission bottlenecks? This study uses barcoded virions to show that in the case of
#influenza
A
#virus
, early within-host replication dynamics (rather than a reduced inoculum population) drive loss of diversity during transmission
@plosbiology.org
🧪
plos.io/4ngicDK
0
19
8
ojrd.biomedcentral.com/articles/10....
. A good read. 🧪
loading . . .
Exploring the uncharted role of cell senescence in rare diseases - Orphanet Journal of Rare Diseases
Background Cellular senescence is a biological process in which the cell cycle is arrested in response to DNA damage caused by different endogenous and exogenous stimuli. In senescent cells, activatio...
https://ojrd.biomedcentral.com/articles/10.1186/s13023-025-03778-1
about 1 month ago
1
2
1
movementecologyjournal.biomedcentral.com/articles/10....
Neat article on tiger adaptation and movement.
loading . . .
Rest to roam: behavioural adaptations of tigers in anthropogenically altered landscapes - Movement Ecology
Background Large carnivores in human-dominated landscapes face significant risks from increased anthropogenic pressure, making it crucial to understand their movement behaviour for conservation strate...
https://movementecologyjournal.biomedcentral.com/articles/10.1186/s40462-025-00594-x
about 1 month ago
0
0
0
Cardiovascular and kidney outcomes of GLP‐1 receptor agonists in adults with obesity: A target trial emulation study - Tang - Diabetes, Obesity and Metabolism - Wiley Online Library
dom-pubs.pericles-prod.literatumonline.com/doi/10.1111/...
🧪
loading . . .
Error - Cookies Turned Off
https://dom-pubs.pericles-prod.literatumonline.com/doi/10.1111/dom.70054
about 1 month ago
0
0
0
www.nature.com/articles/s43...
🧪 Interesting article on deep active optimization for low data problems. The back propagation out of local minima and benchmarks on finding tricky global minima using DNN is cool. The discussion on tradeoffs between Bayesian optimization and active optimization is cool
loading . . .
Deep active optimization for complex systems - Nature Computational Science
This study introduces a deep active optimization pipeline that effectively tackles high-dimensional, complex problems with limited data. The approach minimizes sample size and surpasses existing metho...
https://www.nature.com/articles/s43588-025-00858-x
about 1 month ago
0
4
0
www.nature.com/articles/s41...
🧪
loading . . .
Machine learning to predict bacteriuria in the emergency department - Scientific Reports
Scientific Reports - Machine learning to predict bacteriuria in the emergency department
https://www.nature.com/articles/s41598-025-16677-z
about 1 month ago
1
2
0
www.nature.com/articles/s41...
what a nice article highlighting deep learning methods to detect brood disease in honeybees
loading . . .
Image-based honey bee larval viral and bacterial diagnosis using machine learning - Scientific Reports
Scientific Reports - Image-based honey bee larval viral and bacterial diagnosis using machine learning
https://www.nature.com/articles/s41598-025-16261-5
about 2 months ago
0
1
0
link.springer.com/article/10.1...
🧪. Really interesting in particular the section on blood pressure control post thrombectomy
loading . . .
Advances in Ischemic Stroke Treatment: Current and Future Therapies - Neurology and Therapy
This review summarizes current concepts in our understanding of stroke anatomy, pathophysiology of cerebral hypoperfusion, and collateral circulation. It also provides an evidence-based update in stro...
https://link.springer.com/article/10.1007/s40120-025-00810-1
about 2 months ago
0
2
1
direct.mit.edu/imag/article...
🧪. Researchers illustrate that the presence of information is far more distributed across the brain than previously thought and that information is fairly accessible
loading . . .
Widespread, perception-related information in the human brain scales with levels of consciousness
Abstract. How does the human brain generate coherent, subjective perceptions—transforming yellow and oblong visual sensory information into the perception of an edible banana? This is a hard problem. ...
https://direct.mit.edu/imag/article/doi/10.1162/imag_a_00240/123569/Widespread-perception-related-information-in-the
about 2 months ago
0
2
0
open-research-europe.ec.europa.eu/articles/5-1...
🧪 unexpected and really fun read. I enjoyed the discussion on developing the ontology and use of Protégé. Makes me want to travel and try this out.
loading . . .
https://open-research-europe.ec.europa.eu/articles/5-1/v2
about 2 months ago
0
1
0
American College of Rheumatology Guidance Statement for Diagnosis and Management of VEXAS Developed by the International VEXAS Working Group Expert Panel - Mekinian - Arthritis & Rheumatology -
acrjournals.onlinelibrary.wiley.com/doi/10.1002/...
🧪 new clinical guidance for this rare disease
loading . . .
American College of Rheumatology Guidance Statement for Diagnosis and Management of VEXAS Developed by the International VEXAS Working Group Expert Panel
Objective Vacuoles E1 enzyme X-linked autoinflammatory somatic syndrome (VEXAS) is a recently identified rare genetic disorder associated with somatic mutations in the UBA1 gene. VEXAS presents with...
https://acrjournals.onlinelibrary.wiley.com/doi/10.1002/art.43287
about 2 months ago
0
0
0
GLP-1 RAs and Ophthalmic Complications in Patients With Type 2 Diabetes url:https://jamanetwork.com/journals/jamanetworkopen/fullarticle/2837378?utm_source=bluesky&utm_campaign=content-shareicons&utm_content=article_engagement&utm_medium=social&utm_term=081225 🧪
about 2 months ago
0
0
0
www.nature.com/articles/s41...
🧪. Article highlights lithium depletion increases amyloid accumulation and Replacement therapy with Li salt prevents pathological changes and memory loss as seen in AD mouse models and ageing wild-type mice.
loading . . .
Lithium deficiency and the onset of Alzheimer’s disease - Nature
Lithium has an essential role in the brain and is deficient early in Alzheimer’s disease, which can be recapitulated in mice and treated with a novel lithium salt that restores the physiological level...
https://www.nature.com/articles/s41586-025-09335-x
about 2 months ago
0
7
3
onlinelibrary.wiley.com/doi/10.1002/...
🧪. lncRNAs have a fairly diverse set of functions and this is a good overview.
loading . . .
The role of long non‐coding RNAs in lung cancer metastasis: Molecular mechanisms, pathogenesis and clinical implications
LncRNAs are localized in cytosol, nucleus, other sub-nuclear compartments, and exosomes in the cell, and play significant role in lung cancer dissemination based on their localizations. LncRNAs have ...
https://onlinelibrary.wiley.com/doi/10.1002/ctm2.70429
about 2 months ago
0
4
2
Integrating Generative Pretrained Transformer and Genetic Algorithms for Efficient and Diverse Molecular Generation - Xu - 2025 -
onlinelibrary.wiley.com/doi/10.1002/...
Happy to see optimization with genetic algorithms and generative pretrained transformer for drug discovery 🧪
loading . . .
Integrating Generative Pretrained Transformer and Genetic Algorithms for Efficient and Diverse Molecular Generation
Compound construction model combines the strengths of deep learning models in understanding complex patterns and the exploratory power of genetic algorithms in navigating the vast chemical space, aim...
https://onlinelibrary.wiley.com/doi/10.1002/minf.70005
2 months ago
0
1
0
aacrjournals.org/cancerres/ar...
🧪
loading . . .
Spatial Multi-omics Defines a Shared Tumor Infiltrative Signature at the Resection Margin in High-Grade Gliomas
Abstract. Despite genomic heterogeneity, most high-grade gliomas (HGG), including IDH-wildtype glioblastoma, display diffusely infiltrative growth, which impedes complete surgical resection and leads ...
https://aacrjournals.org/cancerres/article/doi/10.1158/0008-5472.CAN-24-4708/763956/Spatial-Multi-omics-Defines-a-Shared-Tumor
2 months ago
0
0
0
www.jmir.org/2025/1/e74976
. 🧪. Very much worth a read.
loading . . .
Enhancing Clinical Data Infrastructure for AI Research: Comparative Evaluation of Data Management Architectures
Background: The rapid growth of clinical data, driven by digital technologies and high-resolution sensors, presents significant challenges for health care organizations aiming to support advanced arti...
https://www.jmir.org/2025/1/e74976
2 months ago
0
1
1
www.nature.com/articles/s41...
Might be of interest for biomarkers for diagnosis, therapeutic response prediction, and risk assessment
loading . . .
A Large-Scale Dataset of Pre-Treatment TCR Repertoires in Colorectal Cancer Patients - Scientific Data
Scientific Data - A Large-Scale Dataset of Pre-Treatment TCR Repertoires in Colorectal Cancer Patients
https://www.nature.com/articles/s41597-025-05611-7
2 months ago
0
0
0
www.sciencedirect.com/science/arti...
Interesting article on the ability of retinal imaging to detect the association of increased aging related to the prevalence of diabetes in schizophrenia patients
loading . . .
The association of retinal age gap with schizophrenia: a cross-sectional analysis
https://www.sciencedirect.com/science/article/pii/S0920996425002683
2 months ago
0
0
0
bmcmedicine.biomedcentral.com/articles/10....
Nice work using TEDDY data for a predictive model of type 1 diabetes risk validated in the TrialNet.
loading . . .
Development and recalibration of a multivariable type 1 diabetes prediction model for type 1 diabetes across multiple screening studies - BMC Medicine
Background Accurate type 1 diabetes prediction is important to facilitate screening for pre-clinical type 1 diabetes to enable potential early disease-modifying interventions and to reduce the risk of...
https://bmcmedicine.biomedcentral.com/articles/10.1186/s12916-025-04225-5
3 months ago
0
0
0
www.nejm.org/doi/full/10....
🧪
loading . . .
Medical Artificial Intelligence and Human Values | NEJM
In this article in the series on artificial intelligence in medicine, the authors explore how human values influence the outputs of large language models and other artificial intelligence models.
https://www.nejm.org/doi/full/10.1056/NEJMra2214183
3 months ago
0
3
0
www.sciencedirect.com/science/arti...
🧪. I wonder if the work has broader applications beyond river networks
loading . . .
New Bayesian and deep learning spatio-temporal models can reveal anomalies in sensor data more effectively
Environmental and water quality monitoring increasingly relies on high-frequency data streams from sensor networks, yet anomalies in these datasets ca…
https://www.sciencedirect.com/science/article/pii/S004313542500836X
3 months ago
0
2
0
genomebiology.biomedcentral.com/articles/10....
🧪
loading . . .
Multi-ancestry genome-wide meta-analysis of 56,241 individuals identifies known and novel cross-population and ancestry-specific associations as novel risk loci for Alzheimer’s disease - Genome Biolog...
Background Limited ancestral diversity has impaired our ability to detect risk variants more prevalent in ancestry groups of predominantly non-European ancestral background in genome-wide association ...
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-025-03564-z
3 months ago
0
2
0
United States Food and Drug Administration Regulation of Clinical Software in the Era of Artificial Intelligence and Machine Learning - Mayo Clinic Proceedings: Digital Health
www.mcpdigitalhealth.org/article/S294...
🧪 helpful article with thoughts on gen AI device regulation
loading . . .
United States Food and Drug Administration Regulation of Clinical Software in the Era of Artificial Intelligence and Machine Learning
The U.S. Food and Drug Administration (FDA) has been regulating medical devices since 1976. The introduction of novel medical devices, including software as a medical device (SaMD) has led to more rec...
https://www.mcpdigitalhealth.org/article/S2949-7612%2825%2900038-0/fulltext
3 months ago
0
3
2
NIH’s CIT and ODSS are co-hosting a session on Cyberinfrastructure and Emerging Technologies. If you’ll be attending, please join us on Monday, July 21, for our session: NIH Track on GenAI, Cyberinfrastructure, Digital Twins, and Quantum Computing.
#ISMB
🧪
3 months ago
0
2
0
jamanetwork.com/journals/jam...
🧪
loading . . .
Time to Progression to Proliferative Diabetic Retinopathy in Type 2 Diabetes
This prognostic study describes the development and validation of survival models using electronic health record data to predict the time to progression to proliferative diabetic retinopathy in adults...
https://jamanetwork.com/journals/jamanetworkopen/fullarticle/2836409
3 months ago
0
1
0
cardiab.biomedcentral.com/articles/10....
🧪 another interesting GLP-1 paper supports the role of GLP-1RA as part of therapy in cardiovascular events risk reduction, especially with high BMI.
loading . . .
Glucagon-like peptide-1 receptor agonist in myocardial infarction and atherosclerotic cardiovascular disease risk reduction: a comprehensive meta-analysis of number needed to treat, efficacy and safet...
Background Glucagon like peptide-1 receptor agonist (GLP-1RA) use in individuals with high atherosclerotic cardiovascular disease (ASCVD) risk reduces major adverse cardiovascular events (MACE). Howev...
https://cardiab.biomedcentral.com/articles/10.1186/s12933-025-02840-3
3 months ago
1
5
2
ccforum.biomedcentral.com/articles/10....
🧪 really interesting review discussing the complex interplay between adiponectin, obesity, and sepsis outcomes and GLP -1.
loading . . .
Harnessing adiponectin for sepsis: current knowledge, clinical insights and future therapies - Critical Care
Adiponectin, a key adipokine primarily secreted by adipocytes, plays crucial roles in metabolic homeostasis and inflammation, exhibiting anti-diabetic, anti-atherogenic, and anti-inflammatory properti...
https://ccforum.biomedcentral.com/articles/10.1186/s13054-025-05516-2
3 months ago
1
3
0
fluidsbarrierscns.biomedcentral.com/articles/10....
🧪review article illustrates compromised brain barriers are ubiquitous pathological features across brain disorders. In fact, at least ~ 41% of brain disorders display dysfunctions and/or structural alterations of brain barriers.
loading . . .
Restoring brain barriers: an innovative approach for treating neurological disorders - Fluids and Barriers of the CNS
The complex etiology of neurological disorders is a major challenge to the identification of therapeutic candidates. Tackling brain vascular dysfunction is gaining attention from the scientific commun...
https://fluidsbarrierscns.biomedcentral.com/articles/10.1186/s12987-025-00688-z
3 months ago
1
17
5
genomebiology.biomedcentral.com/articles/10....
🧪. Researchers integrate genetic, epigenetic, and cytokine response data from the same individuals demonstrating that dynamic DNA methylation results in immune-related memory
loading . . .
Long-term DNA methylation changes mediate heterologous cytokine responses after BCG vaccination - Genome Biology
Background Epigenetic reprogramming shapes immune memory in both innate (trained immunity) and adaptive immune cells following Bacillus Calmette-Guérin (BCG) vaccination. However, the role of dynamic ...
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-025-03611-9
3 months ago
0
3
0
www.frontiersin.org/journals/car...
🧪. Thoughtful review raising many points of ai assisted patient outcomes including patient adherence to ai alerts from wearables.
loading . . .
Frontiers | Artificial intelligence in atrial fibrillation: emerging applications, research directions and ethical considerations
Atrial fibrillation (AF) is the most prevalent sustained arrhythmia and a major contributor to stroke and heart failure. Despite progress in management, chal...
https://www.frontiersin.org/journals/cardiovascular-medicine/articles/10.3389/fcvm.2025.1596574/full
3 months ago
0
2
1
www.nature.com/articles/s41...
🧪. Neat article that the illustrates the potential of slice Transformers for explainability and 3d medical imaging analysis.
loading . . .
Medical slice transformer for improved diagnosis and explainability on 3D medical images with DINOv2 - Scientific Reports
Scientific Reports - Medical slice transformer for improved diagnosis and explainability on 3D medical images with DINOv2
https://www.nature.com/articles/s41598-025-09041-8
3 months ago
0
1
0
diabetesjournals.org/care/article...
🧪
loading . . .
A Multimodal Predictive Model for Chronic Kidney Disease and Its Association With Vascular Complications in Patients With Type 2 Diabetes: Model Development and Validation Study in South Korea and the...
OBJECTIVE. To develop a multimodal model to predict chronic kidney disease (CKD) in patients with type 2 diabetes mellitus (T2DM), given the limited resear
https://diabetesjournals.org/care/article/doi/10.2337/dc25-0355/162864/A-Multimodal-Predictive-Model-for-Chronic-Kidney
3 months ago
0
2
0
genomebiology.biomedcentral.com/articles/10....
Researchers describe a model of gene regulation that involves positioning active cis-regulatory elements on domain surfaces.
loading . . .
Regulatory roles of three-dimensional structures of chromatin domains - Genome Biology
Background Transcriptional enhancers usually, but not always, regulate genes within the same topologically associating domain (TAD). We hypothesize that this incomplete insulation is partially due to ...
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-025-03659-7
3 months ago
0
0
0
Early diagnosis of vascular Ehlers-Danlos syndrome through AI-powered facial analysis: Results from the Montalcino Aortic Consortium - Genetics in Medicine Open
www.gimopen.org/article/S294...
🧪 really neat work
loading . . .
Early diagnosis of vascular Ehlers-Danlos syndrome through AI-powered facial analysis: Results from the Montalcino Aortic Consortium
Vascular Ehlers-Danlos syndrome (vEDS), which is caused by COL3A1 pathogenic variants, is a rare heritable aortic and arterial disorder associated with early mortality, mainly due to spontaneous vascu...
https://www.gimopen.org/article/S2949-7744%2825%2901473-6/fulltext
3 months ago
2
4
1
Diagnosis and Treatment of Type 2 Diabetes in Adults: A Review url:https://jamanetwork.com/journals/jama/fullarticle/2835629?utm_source=bluesky&utm_campaign=content-shareicons&utm_content=article_engagement&utm_medium=social&utm_term=062525 🧪
4 months ago
0
2
0
pubmed.ncbi.nlm.nih.gov/40550582/
🧪
loading . . .
British Society of Gastroenterology guidelines on inflammatory bowel disease in adults: 2025 - PubMed
In response to recent advancements in inflammatory bowel disease (IBD) management, the British Society of Gastroenterology (BSG) Clinical Services and Standards Committee (CSSC) has commissioned the B...
https://pubmed.ncbi.nlm.nih.gov/40550582/
4 months ago
0
0
0
Load more
feeds!
log in