Plant-Microbe Interactions
@utrechtpmi.bsky.social
📤 940
📥 251
📝 20
@Utrecht University
https://www.uu.nl/en/research/plant-microbe-interactions
pinned post!
The plant microbiome starter pack is far from complete. Let us know if you want to be on it!
go.bsky.app/QG4wCyf
add a skeleton here at some point
10 months ago
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Plant-Microbe Interactions
Roeland Berendsen
3 months ago
Really nice work from
@jellespooren.bsky.social
showing that disease-suppressive soils might sometimes be generated in the phyllosphere. Turning the concept of soilborne legacies upside down 🌱🦠 With
@cornepieterse.bsky.social
@svanwees.bsky.social
and others
@utrechtpmi.bsky.social
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Roeland Berendsen
7 months ago
@y-song.bsky.social
doing a great job at explaining the importance of the potato microbiome at the
@utrechtuniversity.bsky.social
microbiome day! Hoping the medical and veterinary microbiome scientists in the audience enjoy the change in perspective.
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🔬 Exciting
#JournalClub
in our group today by
@nielsaerts.bsky.social
! We discussed the immense and multilayered complexity of hormonal cross-regulation in plant immunity, based on this preprint:
www.biorxiv.org/content/10.1...
. 🌿🧬A must-read for those fascinated by plant defense and signaling!
7 months ago
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Tatsuya Nobori
7 months ago
Conserved immunomodulation and variation in host association by Xanthomonadales commensals in Arabidopsis root microbiota
www.nature.com/articles/s41...
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Conserved immunomodulation and variation in host association by Xanthomonadales commensals in Arabidopsis root microbiota - Nature Plants
The authors show that immunosuppression is highly conserved in the bacterial order Xanthomonadales. This feature, which preceded their specialization as host-adapted pathogens, probably contributes to...
https://www.nature.com/articles/s41477-025-01918-w
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Interesting journal club by
@mpapadopoulou.bsky.social
about
www.nature.com/articles/s41...
. Evidence for the promotion of specific microbial ecological clusters to increase soybean plant fitness in response to nutrient deficiency. Also interesting for
microbiomes4soy.eu
7 months ago
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Plant-Microbe Interactions
Roeland Berendsen
7 months ago
We continue to build the Plant Microbiome Starter Pack. Please let us know if you or others are missing!
go.bsky.app/QG4wCyf
add a skeleton here at some point
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Great talk by Heribert Hert on microbiomes in relation to drought resistance, regreening strategies and the orphan crop Fonio
microbiomejournal.biomedcentral.com/articles/10....
8 months ago
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Plant-Microbe Interactions
Ronnie de Jonge
8 months ago
And so it was! Great defense, great thesis.
#ProudSupervisor
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Plant-Microbe Interactions
Roeland Berendsen
8 months ago
Symposium in celebration of the PhD defense of
@gijsselten.bsky.social
is of course kicked off by
@gijsselten.bsky.social
following intro by
@dejongepmi.bsky.social
!
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Roeland Berendsen
8 months ago
@gijsselten.bsky.social
demonstrated that plants select bacterial functions using a SuperSynCom (1000 strains)
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Roeland Berendsen
8 months ago
Next up: Simon Radutoiu about the role of LysM receptors in symbiosis between legumes and rhizobia
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Plant-Microbe Interactions
Roeland Berendsen
8 months ago
Maria Suarez Diez (WUR) about constraint-based modelling of SynComs: already complex with a SynCom of three!
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Roeland Berendsen
8 months ago
Great line up before the PhD defense of
@gijsselten.bsky.social
: now Ruben Garrido-Oter on experimental evolution on the plant
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Plant-Microbe Interactions
Yang Song
9 months ago
Five years of hard work has paid off! 🎉 What a nice new year surprise—we made it to the cover of Nature Microbiology! 🌟 Acknowledgment to all co-authors and specially Elisa Atza for producing this cover image!
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🎉 Congratulations to Dr. Jelle Spooren on the cum laude defense of his PhD thesis, "Plant-driven assembly of disease-suppressive microbiomes" 🌱🦠 🎓 Thanks to
@jurriaanton.bsky.social
and
@algazuccaro.bsky.social
for their thoughtful opposition in the defense and the great talks during the seminar!
9 months ago
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Tatsuya Nobori
9 months ago
New year, new paper! Now published in
@nature.com
. We identified and characterised diverse immune cell states in plants under pathogen attack. My postdoc work in the Ecker lab at
@salkinstitute.bsky.social
. A thread (0/n)
#PlantScience
www.nature.com/articles/s41...
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Great journal club bij
@gijsselten.bsky.social
about
www.nature.com/articles/s42...
showing how to get passed the linear limitations of traditional methods in microbiome research!
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Agricultural practices influence soil microbiome assembly and interactions at different depths identified by machine learning - Communications Biology
Machine learning breaks through the linear limitations of traditional methods, providing deeper insights into the assembly, interactions, and mechanisms underlying microbiomes at varying soil depths u...
https://www.nature.com/articles/s42003-024-07059-8
9 months ago
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Nature Microbiology
9 months ago
Short on time? Read the Research Briefing for a short overview of the paper by
@rlberendsen.bsky.social
@y-song.bsky.social
here:
www.nature.com/articles/s41...
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Potato crop performance is predicted by tuber microbiome - Nature Microbiology
A predictive model developed using machine learning, high-throughput sequencing of the microbiomes associated with seed tubers and drone imaging of the crops growing from the tubers can forecast the p...
https://www.nature.com/articles/s41564-024-01893-6
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Nature Microbiology
9 months ago
OUT NOW: The seed tuber microbiome can predict future growth of potato varieties in the field 🥔🦠🌱
@rlberendsen.bsky.social
@y-song.bsky.social
& co
www.nature.com/articles/s41...
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Seed tuber microbiome can predict growth potential of potato varieties - Nature Microbiology
Time-resolved drone imaging of potato crop development and seed tuber microbiome data can be used to predict potato vigour, or growth potential, in next-season crops in trial fields.
https://www.nature.com/articles/s41564-024-01872-x
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François Mayer
9 months ago
New RESEARCH BRIEFING - Potato crop performance is predicted by tuber microbiome By Yang Song & Roeland Berendsen
@rlberendsen.bsky.social
www.nature.com/articles/s41...
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Potato crop performance is predicted by tuber microbiome - Nature Microbiology
A predictive model developed using machine learning, high-throughput sequencing of the microbiomes associated with seed tubers and drone imaging of the crops growing from the tubers can forecast the p...
https://www.nature.com/articles/s41564-024-01893-6
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Plant-Microbe Interactions
Roeland Berendsen
9 months ago
www.nature.com/articles/s41...
🌱🚜 Excited to see our paper in
@naturemicrobiol.bsky.social
! Amazing effort by
@y-song.bsky.social
in collaboration with TU Delft (Neil Budko, Elisa Atza) and the Dutch potato breeding industry to harness the power of the microbiome! 🥔🔬@utrechtpmi.bsky.social
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Seed tuber microbiome can predict growth potential of potato varieties - Nature Microbiology
Time-resolved drone imaging of potato crop development and seed tuber microbiome data can be used to predict potato vigour, or growth potential, in next-season crops in trial fields.
https://www.nature.com/articles/s41564-024-01872-x
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Plant-Microbe Interactions
The plant microbiome starter pack is far from complete. Let us know if you want to be on it!
go.bsky.app/QG4wCyf
add a skeleton here at some point
10 months ago
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25
reposted by
Plant-Microbe Interactions
Corné Pieterse
10 months ago
We have a vacancy for a PhD position with our recently started PMI PI
@arsheed-sheikh.bsky.social
at Utrecht University. Please apply via:
www.uu.nl/en/organisat...
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Bas E. Dutilh
10 months ago
We have an opening for a 4-year postdoc position to study the
#rhizosphere
#microbiome
in
@utrechtuniversity.bsky.social
@w-u-r.bsky.social
, joint project with
@marnixmedema.bsky.social
in the context of MiCRop. Please tag/forward this to potential candidates and/or repost:
www.uu.nl/en/organisat...
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Bioinformatics Postdoc at UU/WUR: Map Metabolic Interactions in the Rhizosphere
Contribute to plant health and our understanding of the metabolic interactions between microbes and plants in the rhizosphere by computational modelling!
https://www.uu.nl/en/organisation/working-at-utrecht-university/jobs/bioinformatics-postdoc-at-uuwur-map-metabolic-interactions-in-the-rhizosphere
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Kevin K. Yang 楊凱筌
11 months ago
I tried to make a bioml starter pack. DM if you want me to add or remove you?
go.bsky.app/2VWBcCd
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Yesterday, our dear colleague Saskia van Wees delivered her inaugural address, 'Plants are anything but defenceless creatures'. A fascinating exploration of plant resilience, hormones and innovation. 🌱 Read more:
www.uu.nl/en/news/inau...
#Science
#uubeta
#UtrechtUniversity
#Plants
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Inaugural lecture by Saskia van Wees: "Plants are anything but defenceless creatures"
Saskia van Wees investigates the intricacies of plant resistance and the role plant hormones play in these processes. Today, she delivers her inaugural lecture.
https://www.uu.nl/en/news/inaugural-lecture-by-saskia-van-wees-plants-are-anything-but-defenceless-creatures
10 months ago
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Franciska de Vries 🟥
10 months ago
It’s out!! We subjected soils from 30 different locations across Europe to extreme events and found that soil fungal and bacterial communities showed consistent responses that could be predicted from their origin! With
@knightjar.bsky.social
and many collaborators!
www.nature.com/articles/s41...
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Soil microbiomes show consistent and predictable responses to extreme events - Nature
Soils from 30 grasslands across Europe were subjected to 4 contrasting extreme climatic events under drought, flood, freezing and heat conditions, with the results suggesting that soil microbiomes fro...
https://www.nature.com/articles/s41586-024-08185-3
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We're super proud of Doctor Sietske van Bentum! A more than outstanding defence of her thesis 'Disease-associated shifts in the rhizosphere microbiome: towards a soy-borne legacy'
10 months ago
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The plant microbiome starter pack is far from complete. Let us know if you want to be on it!
go.bsky.app/QG4wCyf
add a skeleton here at some point
10 months ago
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Great journal club today!
@sophievijverberg.bsky.social
guided us through an exciting Nature Microbiol paper by Karasov et al., exploring the Arabidopsis thaliana phyllosphere microbiome across Europe. A valuable resource for the plant microbiome field:
www.nature.com/articles/s41...
10 months ago
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"Digging up Europe! 🌍🪱 The UUPMI - Microbiomes4Soy team just collected 100 soil samples from soybean fields across five countries. Why? To unlock the secrets of soil microbiomes for better crops! Stay tuned for some 'ground-breaking' discoveries! 🌱🔬
#Microbiomes4Soy
#plantmicrobiome
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Microbiomes4Soy Soil Sampling Campaign: Collecting Agricultural Soil Across Europe – Microbiomes4soy
https://microbiomes4soy.eu/microbiomes4soy-soil-sampling-campaign-collecting-agricultural-soil-across-europe/
11 months ago
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Corné Pieterse
11 months ago
First steps on Bluesky.... Let's test how it works by re-sharing Klokhuis Dutch national kids TV broadcast on our Netherlands Plant Ecophenotyping Centre:
hetklokhuis.nl/tv-uitzendin...
#PlantScience
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Uitzending - Plantenlaboratorium
Om ervoor te zorgen dat iedereen op de aardbol genoeg te eten heeft zullen we heel slim met ons voedsel om moeten gaan. Tirsa gaat naar een hightech plantenlaboratorium in Utrecht. Daar wordt uitvoeri...
https://hetklokhuis.nl/tv-uitzending/5539/plantenlaboratorium
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Utrecht PMI is on Bluesky!
11 months ago
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Utrecht PMI is on Bluesky!
11 months ago
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