David Martínez Millán
@dmartmillan.bsky.social
📤 29
📥 50
📝 11
I am an engineer in a biological world.
pinned post!
🎉 I'm thrilled to announce that OpenVariant is finally published! A comprehensive toolkit to facilitate reading, parsing and refinement of diverse input file formats in a customizable structure, all within a single process.
@bbglab.bsky.social
at
@irbbarcelona.bsky.social
doi.org/10.1093/bioi...
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OpenVariant: a toolkit to parse and operate multiple input file formats
AbstractSummary. Advances in high-throughput DNA sequencing technologies and decreasing costs have fueled the identification of small genetic variants (suc
https://academic.oup.com/bioinformatics/article/40/12/btae714/7914924
10 months ago
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reposted by
David Martínez Millán
Barcelona Biomedical Genomics Lab
9 months ago
As we are quite new in that network, we take the chance to share our research achievements of the last year. Here you can follow a short 🧵of our latest publications: 1️⃣
www.nature.com/articles/s41...
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Five latent factors underlie response to immunotherapy - Nature Genetics
Analysis of human tumor datasets shows that all features that appear significantly associated with immunotherapy response and survival may be collapsed into five latent factors: tumor mutation burden, T cell effective infiltration, TGF-β activity in the microenvironment, prior treatment and tumor proliferative potential.
https://www.nature.com/articles/s41588-024-01899-0
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reposted by
David Martínez Millán
Alfonso Valencia
9 months ago
En memoria de Joan Guinovart, por Francesc Posas, Raúl Mendez y Margarida Corominas en nombre del
@irbbarcelona.org
del Que fue fundador. DEP
elpais.com/espana/catal...
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Muere a los 77 años Joan Guinovart, fundador y exdirector del Institut de Recerca Biomèdica (IRB)
El científico y catedrático, Creu de Sant Jordi en 2014, fue una figura clave en el ámbito de la bioquímica
https://elpais.com/espana/catalunya/2025-01-01/muere-a-los-77-anos-joan-guinovart-fundador-y-exdirector-del-institut-de-recerca-biomedica-irb.html?ssm=bsky_CC
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reposted by
David Martínez Millán
Stephen Turner
10 months ago
OpenVariant: a toolkit to parse and operate multiple input file formats
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btae714/7914924
🧬🖥️🧪
https://github.com/bbglab/openvariant
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reposted by
David Martínez Millán
Javier Santoyo
10 months ago
OpenVariant: a toolkit to parse and operate multiple input file formats.
#Genomics
#VariantFormats
#InputFileFormats
#Bioinformatics
🧬 🖥️ Github;
github.com/bbglab/openv...
academic.oup.com/bioinformati...
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OpenVariant: a toolkit to parse and operate multiple input file formats
AbstractSummary. Advances in high-throughput DNA sequencing technologies and decreasing costs have fueled the identification of small genetic variants (suc
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btae714/7914924
0
4
3
🎉 I'm thrilled to announce that OpenVariant is finally published! A comprehensive toolkit to facilitate reading, parsing and refinement of diverse input file formats in a customizable structure, all within a single process.
@bbglab.bsky.social
at
@irbbarcelona.bsky.social
doi.org/10.1093/bioi...
loading . . .
OpenVariant: a toolkit to parse and operate multiple input file formats
AbstractSummary. Advances in high-throughput DNA sequencing technologies and decreasing costs have fueled the identification of small genetic variants (suc
https://academic.oup.com/bioinformatics/article/40/12/btae714/7914924
10 months ago
3
22
11
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