GlyGen
@glygen.bsky.social
๐ค 147
๐ฅ 288
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Computational and Informatics Resources for Glycoscience
https://www.glygen.org/
This Thanksgiving let's acknowledge Kobayshi et al.'s findings: turkeys can act as bridges for influenza across avian species that are well insulated from each other. Suddenly, TurDuckEn has a much more sinister meaning. Learn more:
www.sciencedirect.com/science/arti...
#GlycoThanksgiving
about 7 hours ago
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๐ข Join us for the next GlySpace Alliance Webinar! ๐๏ธ Tuesday, December 2, 2025 | 10 AM ET ๐๏ธDr. Kelley Moremen & Chin Huang present: โModeling glycans with AlphaFold 3: capabilities, caveats, and limitationsโ ๐๏ธDetails:
wiki.glygen.org/GlySpace_All...
#glycotime
#glygen
#researchtools
6 days ago
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reposted by
GlyGen
BiomarkerKB
8 days ago
Excited to share that GlyGen & BiomarkerKB were featured at
#SFG2025
Annual Meeting in San Diego, CA! Cyrus Chun Hong Au Yeung presented on a Large Language Model (LLM)-based Workflow for mining glycan biomarkers and harmonizing the results into BiomarkerKB & GlyGen.
#glycotime
#biomarker
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๐ The GlySpace Alliance & Glycan Function Workshop at
#SFG2025
brought together researchers, educators and students to advance glycan function annotation and digital representation and lead to great engagement, new examples, and collaborative insights!
#GlySpaceAlliance
#Glycotime
#Bioinformatics
12 days ago
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๐Last day of the
#SFG2025
Annual Meeting in San Diego, CA! Visit the GlySpace Alliance booth to learn how GlyGen, GlyCosmos, and Glyco@Expasy are working together to connect the global glycoscience community.
#GlySpaceAlliance
#GlyGen
#GlyCosmos
#GlycoExpasy
#Glycotime
14 days ago
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๐ข Join us for the next GlySpace Alliance Webinar! ๐๏ธ Tuesday, November 18, 2025 | 10 AM ET ๐๏ธDr. Rene Ranzinger presents: โNew Features and Tools in GlyGen v2.9โ ๐๏ธDetails:
wiki.glygen.org/GlySpace_All...
๐ Join our mailing list:
docs.google.com/forms/d/e/1F...
#glycotime
#glygen
#researchtools
26 days ago
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Excited to announce that Dr. Kate Warner represented
#GlyGen
at last weekโs
#OpenTargets
hackathon, collaborating with members from The Hyve to improve antibody target selection using GlyGen glycosylation data. Many thanks to the organizers for an inspiring and collaborative event!
#glycotime
about 1 month ago
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Missed our September webinar with
@dbojar.bsky.social
on glycan structure and AI? Learn how GlyContact analyzes glycan 3D conformations, improves AI-based binding predictions, and enables structural insights from sequences. Check it out:
www.youtube.com/watch?v=jqY-...
#Glycotime
#GlycoAI
about 1 month ago
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The 2025 Nobel Prize in Physiology or Medicine recognizes Brunkow, Ramsdell, and Sakaguchi for their discovery of Tregs and the regulatory role of FOXP3, an O-GlcNAcylated protein. Explore FOXP3 on the GlyGen portal:
glygen.org
and learn more here:
www.nature.com/articles/s41...
#glycotime
about 2 months ago
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Attending
#ASHG2025
? Stop by Booth 1428 (Oct 15โ17, 9:30โ4:30) for live tool demos, DCC Spotlights & 1:1 conversations with
#CFDE
leaders! Also attend Scientific Highlights of the CFDE: Oct 16, 11:45am โ1:15pm, Room 259A
#glycotime
about 2 months ago
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๐Commun Fund Data Ecosystem ASHG 2025 Networking Event Discover groundbreaking research via posters, lightning talks, demos and more! ๐Date: October 14 | 7-9PM ET at the Westin Boston Seaport District Registration open (space limited to 100):
docs.google.com/forms/d/e/1F...
#glycotime
#CFDE
about 2 months ago
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Excited to share highlights from
#InCoB2025
in Kolkata, India!
@rmazumde.bsky.social
presented CensuScope & SlimNT for metagenomics, and with Dr. Kiyoko Aoki-Kinoshita co-led a GlySpace workshop on GlyGen & GlyCosmos. Proud to see
#GlyGen
featured globally!
#glycotime
#bioinformatics
about 2 months ago
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๐ข Join us for the next GlySpace Alliance Webinar! ๐๏ธ Tuesday, October 7, 2025 | 10 AM ET ๐๏ธDr. Guinevere Lageveen-Kammeijer presents: โFrom Data to Discovery: GlycoGenius for Single-Cell and High-Throughput Glycomicsโ ๐ Info:
wiki.glygen.org/GlySpace_All...
#glycotime
#glygen
#webinar
2 months ago
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The 2025 Fall Volunteer Program which began earlier this month is now in full swing! This program allows students to gain hands-on experience in
#biocuration
and publication analysis during the school year. We're excited to see the impact our volunteers will make this fall!
#glycotime
#internship
2 months ago
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๐Explore whatโs new in
#GlyGen
v2.7 & v2.8! From new species support to dynamic tables and the Glycosite Miner tool, see how the latest updates make glycan and protein data exploration easier. Watch the playlist here:
youtube.com/playlist?lis...
#glycotime
#Glycomics
#Proteomics
#Bioinformatics
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What's New in GlyGen 2.7 & 2.8 - YouTube
Discover the latest features introduced in GlyGen v2.7 and v2.8. This playlist walks you through new tools and improvements designed to make exploring protei...
https://youtube.com/playlist?list=PLLcSDnGh0I535GisMAYlrJ1MILuBdjCKb&si=lq6ZSoCP_EZvdzGQ
2 months ago
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๐จGlySpace Alliance Webinar Reminder: Join us tomorrow at 10 AM ET!
#glycotime
#bioinformatics
add a skeleton here at some point
2 months ago
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Kate Warner will be representing
#GlyGen
at the Protein Annotations in the Age of AI symposium at University College London! Looking forward to new insights on AI-driven protein classification, annotation and analysis, and engaging with proteomic resources and researchers.
#CATH
#UCL
#AIResearch
2 months ago
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๐ BioCompute Webinar Alert See how the
#BioCompute
workflow documentation standard is integrated into
@nextflow.io
,
@dnanexus.bsky.social
,
#CFDE
, and
#Velsera
platforms. Velsera is hosting a webinar to demo the tool: ๐Wednesday, September 10 @ 3 PM ET ๐ Register:
info.velsera.com/unlocking-bi...
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Unlocking BioCompute Objects: Advancing Interoperability and Regulatory Excellence
Learn best practices for regulatory submissions of computational workflows and demonstrate how BCO documentation can accelerate and streamline FDA reviews.
https://info.velsera.com/unlocking-biocompute-objects-advancing-interoperability-and-regulatory-excellence
3 months ago
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๐ข Join us for the next GlySpace Alliance Webinar! ๐๏ธ Tuesday, September 16, 2025 | 10 AM ET ๐๏ธ
@dbojar.bsky.social
โฌ presents: โStructure, Function and Everything in Between: Glyco-AI goes 3Dโ ๐ Info:
wiki.glygen.org/GlySpace_All...
#glycotime
#bioinformatics
#cfde
3 months ago
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Excited to share that our CFDE-GlyGen interns will be presenting their work from this summer at the upcoming CFDE Decoding the Data Ecosystem Virtual Symposium! Donโt miss their work in action: ๐ Date: Aug 27 | 12:30โ5 PM ET ๐ Register @
orau.org/cfde-trainin...
#glycotime
#cfde
#intern
3 months ago
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Excited to share that Jeet Vora, Project Coordinator for Glygen, was featured in GWโs Himmelfarb Library Newsletter! Jeet discusses his bioinformatics journey and how his work enhances accessibility and drives collaboration. Read more @
guides.himmelfarb.gwu.edu/newsletter/2...
#glycotime
3 months ago
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๐ฌ Decoding the Data Ecosystem Virtual Symposium Explore CFDE tools, resources, and omics datasets including genomics, proteomics, metabolomics and more that drive discoveries across disciplines. ๐ Date: Aug 27 | 12:30โ5 PM ET ๐ More info:
orau.org/cfde-trainin...
#glycotime
#cfde
3 months ago
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The 2025 CFDE-GlyGen-HIVE Summer Symposium was a huge success! Twenty-one interns & volunteers shared the incredible work they accomplished in this eight-week program, with participants joining from as far as Singapore. Congratulations to all our grads!
#glycotime
#CFDE
4 months ago
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Kate Warner presenting โInsights from GlyGen in Developing Sustainable Knowledgebases with Well-Defined Infrastructure Stacksโ at
#ISMB2025
showing how thoughtful design enables scalable, sustainable biodata infrastructure for FAIR and open glycoscience.
#glycotime
#ISMBECCB2025
4 months ago
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We are excited to announce the upcoming 2025 CFDE-GlyGen-HIVE Lab Summer Symposium! Hear from our interns & volunteers as they share research theyโve tackled over the past 8 weeks. ๐๏ธ Thursday, July 31, 2025 | 10AM ET ๐ Info:
hivelab.biochemistry.gwu.edu/wiki/Symposi...
#glycotime
#cfde
4 months ago
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Don't miss this webinar hosted by the Ma'ayan Lab & the Mount Sinai Center for Bioinformatics. ๐งฌAnna Byrd presents "ChEA-KG: Explore & Analyze the Human Transcription Factor Regulatory Network" ๐๏ธThursday, July 24, 2025 | 2:00 - 3:00 PM ET ๐ Register at
mountsinai.zoom.us/webinar/regi...
4 months ago
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๐ข Donโt miss Kate Warnerโs talk at ISMB 2025 on "Insights from GlyGen: Developing sustainable knowledgebases with well-defined infrastructure stacks" ๐๏ธ Wed, July 23, 2025 | 14:00 BST ๐ Info:
www.iscb.org/ismbeccb2025...
#glycotime
#bioinformatics
#iscb
4 months ago
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๐ข Join us for the next GlySpace Alliance Webinar! ๐๏ธ Tues, July 29, 2025 | 10 AM ET ๐๏ธ Dr. Rene Ranzinger presents: โExploring GlyGenโs v2.8 Featureโ ๐ Info:
wiki.glygen.org/GlySpace_All...
#glycotime
#bioinformatics
#cfde
4 months ago
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Check out
BiomarkerKB.org
- a knowledgebase that streamlines access to biomarker data by mapping, standardizing, curating and organizing biomarker data from public sources, with tools to search and explore info that supports biomedical research and discovery
#precisionmedicine
#clinicaltrials
#cfde
5 months ago
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โ The 2025 ๐๐น๐๐๐ฒ๐ป ๐ฎ๐ป๐ป๐๐ฎ๐น ๐บ๐ฒ๐ฒ๐๐ถ๐ป๐ด on June 11 and 12 was a huge success! Weโre grateful for the insightful feedback from our advisors and guests. The developer meeting that followed was all about shaping the future of GlyGen, new releases and collaborations. Exciting new features ahead!
#glycotime
5 months ago
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๐ข GlyGenโs Co-PI and team member M. Tiemeyer, and colleagues, R. Weiss and L. Wells, spoke at Changwon University and the Korean Society for Glycobiology Annual Meeting (June 26โ27). Mike gave a talk titled โAnnotating Glycan Functions to Build Connectivity Across Datatypes.โ
#glycotime
5 months ago
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๐ The ๐๐น๐๐๐ฒ๐ป-๐๐๐๐ ๐ฆ๐๐บ๐บ๐ฒ๐ฟ 2025 ๐๐ป๐๐ฒ๐ฟ๐ป๐๐ต๐ถ๐ฝ is in full swing! Now in week 5, our four talented interns are deep into their glycoinformatics and data wrangling projects. Weโre proud to support and mentor the next generation of data scientists as they explore glycoscience data.
#CFDE
#glycotime
5 months ago
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๐ New paper from the GlyGen Consortium authored by Dr. Robel Kahsay: GlycoSiteMinerโan ML/AI-assisted pipeline for mining glycosylation sites from PubMed abstracts. Published in Glycobiology.
#glycotime
#bioinformatics
#glycobiology
6 months ago
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Excited to share GlyGen was featured at the GW 2025 Bioinformatics Symposium! Urnisha Bhuiyan presented our poster on glycoscience data integration, developed with
@rmazumde.bsky.social
, Kate Warner, Jeet Vora & Robel Kahsay. Proud to advance data accessibility!
#glycotime
#bioinformatics
7 months ago
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๐จ Join us for the next GlyGen Webinar! ๐ May 13, 2025 ๐ Dr. Issaku Yamada, Noguchi Institute ๐ก Topic: Bridging Glycan Data: Integrating Structures, Notations and Knowledge with Semantic Web Technologies ๐ Join Live:
gwu-edu.zoom.us/j/91498498310
๐ Details:
wiki.glygen.org/Main_Page
#glycotime
7 months ago
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GlyGen hosted the 3rd Workshop on Glycan Function Annotation at
#BioCuration2025
in Kansas City. We made great progress identifying needs and developing solutions to represent glycan functions across real-world examples of glycobiological complexity. Workshop report coming soon.
#glycotime
#flyglyco
7 months ago
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@rmazumde.bsky.social
presenting BiomarkerKB at
#BioCuration2025
โ a scalable, ontology-driven hub for clinically relevant biomarkers. Built for easy integration into resources like GlyGen using standard formats & open licenses. Missing your favorite biomarker? Tell us!
#biomarkers
#dataintegration
7 months ago
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Exciting news from the CFDE Spring Meeting in Bethesda! The GlyGen and the BiomarkerKB teams showcased their work at the poster session on March 24-25. Jeet Vora presented on the GlyGen-CFDE internship and Daniall Masood presented the BiomarkerKB portal, which received an award!
#glycotime
#CFDE
8 months ago
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Explore the latest GlyGen webinar with Dr. Zhiyong Lu! Learn how AI is transforming biomedical text mining for literature retrieval and curation. Watch now on our YouTube channel:
youtu.be/AHPPGECs7KQ
#AI
#BiomedicalResearch
#DataCuration
#glycotime
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Zhiyong Lu - AI Meets Data Curation: A Two Way Street
YouTube video by GlyGen myGlyGen
https://youtu.be/AHPPGECs7KQ
8 months ago
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GlyGen & BiomarkerKB teams participated in the CFDE Spring Meeting in Bethesda on March 24-25. BiomarkerKB hosted a breakout session focused on interactive discussions & upcoming plans. Both teams presented posters and engaged with other CFDE members.
#glycotime
#cfde
#spring2025
8 months ago
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๐ข Mark your calendars! The next GlyGen Webinar is just around the corner! ๐ April 1, 2025 | ๐ 10 AM EST ๐ค Featuring: Dr. Zhiyong Lu, NIH ๐ฌ Topic: Biomedical Text Mining for Literature Retrieval & Curation ๐ป Join us live: gwu-edu.zoom.us/j/91498498310 ๐ Full details:
wiki.glygen.org
#glycotime
8 months ago
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Excited to present BiomarkerKB at the CFDE Spring Meeting tomorrow in Bethesda! Looking forward to connecting with fellow researchers and exploring innovative tools for biomedical data analysis. Join us March 25-26 for posters, demos, and collaborative discussions! ๐
cfdeconnect.org/spring25/
#CFDE
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CFDE Spring 2025 Meeting - CONNECT ICC
Common Fund Data Ecosystem (CFDE) will host a two-day, in-person program meeting in Bethesda, MD on March 25th and 26th. This will be an opportunity for CFDE members to come ... Read more
https://cfdeconnect.org/spring25/
8 months ago
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Missed our March webinar with Dr. Nicholas Riley on glycoproteomics data analysis? Catch the full presentation on our YouTube channel! Learn about Glycounter, ADS technology, and new tools for interpreting complex glycopeptide MS spectra. Check it out:
youtu.be/Y7yGFfYw3G0
#glycotime
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Dr. Nicholas M. Riley - Tools To Explore Complex Glycoproteomics Data
YouTube video by GlyGen myGlyGen
https://youtu.be/Y7yGFfYw3G0
8 months ago
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Dr. Hudson Freeze and Dr. Michael Tiemeyer
@flyglyco.bsky.social
on Capitol Hill Day organized by
@faseborg.bsky.social
and
@sfglycobiology.bsky.social
, advocating for federal funding in the glyco domain and beyond!
#glycotime
8 months ago
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๐จ Join us for the next GlyGen Webinar! ๐ April 01, 2025 | ๐ 10 AM EST ๐ Dr. @Zhiyong Lu, NIH ๐ก Biomedical Text Mining for Literature Retrieval & Curation ๐ gwu-edu.zoom.us/j/91498498310 Missed previous webinars? Check our YouTube: @glygenmyglygen4223
#glycotime
#webinar
#NIH
8 months ago
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๐ข Reminder! Join us at the GlyGen Webinar! ๐ Mar 11, 2025 | ๐ 10 AM EST ๐ Speaker: Dr. Nicholas M. Riley
@nmriley.bsky.social
,
@uwchemistry.bsky.social
๐ก Tools To Explore Complex Glycoproteomics Data ๐ Details:
wiki.glygen.org
Donโt miss it!
#glycotime
9 months ago
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๐จ Join us for the next GlyGen Webinar! ๐ Mar 11, 2025 | ๐ 10 AM EST ๐๏ธ Speaker: Dr. Nicholas M. Riley
@nmriley.bsky.social
,
@uwchemistry.bsky.social
๐ก Tools To Explore Complex Glycoproteomics Data ๐ Details:
wiki.glygen.org
#webinar
#glycotime
9 months ago
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GNOme manuscript published! Thrilled to announce the publication of โGNOme, an ontology for glycan naming and subsumptionโ authored by Nathan Edwards, Wenjin Zhang and Michelle Vesser. Explore at
gnome.glyomics.org
#glycomics
#glycotime
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GNOme
GNOme - Glycan Naming and Subsumption Ontology.
http://gnome.glyomics.org/
9 months ago
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๐ข Donโt miss Dr. Alexander Lachmannโs talk on ARCHS4 updates! Learn how this resource can enhance your RNA-seq research ๐ Feb 27, 2025 | ๐ 2โ3 PM ET ๐ Register:
maayanlab.cloud/turl/a60f13d9
#glycotime
#CFDE
#archs4
#RNAseq
9 months ago
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GlyGen 2.7 Feature Spotlight: Full-screen tables for glycan & protein details pages! - Maximized viewing - Seamless toggling - Enhanced usability Explore at
glygen.org
#feature
#release
#glycans
#proteins
#glycotime
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9 months ago
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