Kieran Lamb
@kieranlamb.bsky.social
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🏴Postdoc @CVRinfo 📊Viral mutational signatures 🧬Protein language models
Our paper is finally out in
@natcomms.nature.com
! Have a look if you're interested in how we can use PLMs to learn more about viral proteins, particularly with limited sequence data!
add a skeleton here at some point
2 days ago
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reposted by
Kieran Lamb
Dan Liu
5 months ago
Our PLM-interact is out in Nature Communications! We show that jointly encoding protein pairs using protein language models improves protein–protein interaction prediction performance and enables fine-tuning to predict mutation effects in human PPIs.
www.nature.com/articles/s41...
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PLM-interact: extending protein language models to predict protein-protein interactions - Nature Communications
Protein structure can be predicted from amino acid sequences with unprecedented accuracy, yet the prediction of protein–protein interactions remains a challenge. Here, authors present a sequence-based...
https://www.nature.com/articles/s41467-025-64512-w
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reposted by
Kieran Lamb
European Virus Bioinformatics Center
6 months ago
📢Join us for the next ECR
#Viromics
Webinar: "Characterising novel viral proteins using protein language models (PLMs)" 🎙️ Kieran Lamb (
@kieranlamb.bsky.social
) | University of Glasgow/UK 🗓️ 8 October 2025, 4 PM CEST 📍 Online | Zoom (register for login details) 👉
coms.osu.edu/webinars/ecr...
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Kieran Lamb
Spyros Lytras
about 1 year ago
Recently we have been doing lots of work on how modern
#AI
methods can be applied to studying virus evolution, so it felt like great timing to write a perspective about it! Very happy to see our paper as editor's pick in JVI!🥳🥳
doi.org/10.1128/jvi....
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Pathogen genomic surveillance and the AI revolution | Journal of Virology
Genomic pathogen sequencing during the COVID-19 pandemic highlighted the critical role of surveillance in understanding the persistence of SARS-CoV-2 in the human population despite high levels of pro...
https://doi.org/10.1128/jvi.01601-24
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