Riya Sinha
@riyavsinha.bsky.social
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CS PhD Student @ Stanford | Research focused on understanding genetic diseases
reposted by
Riya Sinha
Open Targets
about 2 months ago
@riyavsinha.bsky.social
@jengreitz.bsky.social
sky.social
@anshulkundaje.bsky.social
y.social
have made the ENCODE-rE2G data available to browse through the E2G portal, a custom-built extension of the Platform 👇 We plan to further integrate their data 👀
e2g.stanford.edu
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E2G
E2G is a tool based on the Open Targets Platform for predicting enhancer-gene interactions.
https://e2g.stanford.edu/
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reposted by
Riya Sinha
Jesse Engreitz
about 2 months ago
Excited for a major milestone in our efforts to map enhancers and interpret variants in the human genome: The E2G Portal!
e2g.stanford.edu
This collates our predictions of enhancer-gene regulatory interactions across >1,600 cell types and tissues. Uses cases 👇 1/
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reposted by
Riya Sinha
Open Targets
about 2 months ago
The Open Targets Platform autumn release is out! 🍂 We have ingested the full dataset of over 13 million enhancer-gene regulatory interactions in the human genome across 1,458 DNase-seq experiments covering 369 cell types and tissues from the ENCODE-rE2G model
blog.opentargets.org/open-targets...
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Open Targets Platform 25.09 has been released!
The September 25 release includes enhancer-gene data predicted by ENCODE-rE2G, molQTL credible sets for targets, new options for the variant structural viewer, and a number of data updates from GWAS C...
https://blog.opentargets.org/open-targets-platform-25-09-release/
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