Zepeng “Phoenix” Mu
@zpmu.bsky.social
📤 32
📥 103
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Postdoc working on immunogenomics and CRISPR with
@soumya-boston.bsky.social
reposted by
Zepeng “Phoenix” Mu
Soumya Raychaudhuri সৌম্য রায়চৌধুরী
6 months ago
So excited to share our latest study on defining the function of disease variants by editing single cells, and assuming them with CRAFT-seq! Special thanks to
@zpmu.bsky.social
and
@baglaenkolab.bsky.social
!
@broadinstitute.org
www.nature.com/articles/s41...
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Precisely defining disease variant effects in CRISPR-edited single cells - Nature
A plate-based assay called CRAFTseq has been developed that uses ‘multi-omic’ single-cell RNA sequencing and direct genotyping of CRISPR edits to test the functional effects of genetic variants o...
https://www.nature.com/articles/s41586-025-09313-3
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reposted by
Zepeng “Phoenix” Mu
Saori Sakaue
11 months ago
📣Excited to share my last postdoc paper with
@soumya-boston.bsky.social
on eQTL mechanisms depending on where the RNA is in the cell!
@broadinstitute.org
@harvardmed.bsky.social
TL;DR:Early RNA eQTL variants in the nucleus and late RNA eQTL variants in the cytosol have distinct molecular mechanism🧵
add a skeleton here at some point
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First Bluesky post! Excited to share the final chapter of my PhD research! We performed a large- scale and thorough scATAC QTL analysis in PBMC, and gained insight on how caQTL can help us better understand disease GWAS and inform future study design.
add a skeleton here at some point
about 1 year ago
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