🌟 #MeetOurDataStewards #6 Dr. Maximilian Müller is @nfdi4bioimage.bsky.social data steward @uni-konstanz.de. With his background in environmental analysis and #toxicology, he can help you with #ResearchDataManagement, #DataManagementPlans and #OMERO. 👉 nfdi4bioimage.de/about-us/dat...

📆 For those who haven't turned the page on their calendar yet, here's a reminder. In November, we look at a colorful piece of microscopy art by Jadranka Macas (Institute of Neurology (Edinger Institute), University Hospital Frankfurt). Read more about it here: 👉 nfdi4bioimage.de/resources-an...

Greetings from NFDI4Bioimage Task Area Leader Björn Grüning at the #EOSCSymposium2025, which is taking place from November 3 to 5 at Brussels. At the conference, Björn Grüning presents the #Galaxy use case, which is one of the first #EOSC candidate use cases. 👉 gxy.io/eosc25 Picture: Nicolas Lobet

We are delighted to announce that we have reached 1,000 followers on Bluesky 🎉 Many thanks to our growing @nfdi4bioimage.bsky.social community for your interest in the topics that concern us as a consortium and for accompanying us on our journey towards FAIR-compliant research data management.

Another #RDM4mic meeting, which focused on research data management for microscopy, took place @uni-muenster.de. 💫 Several NFDI4BIOIMAGE task area leaders and data stewards met on site and contributed to the program. Susanne Kunis' presentation is already available: doi.org/10.5281/zeno...

🌟#MeetOurDataStewards: #5: Mohsen Ahmadi In our latest blog post, Mohsen explains how he developed a #FAIR-compliant workflow that connects #OMERO, #eLabFTW, and #Adamant into one integrated bioimaging data management pipeline. Read about the approach here: 👉 nfdi4bioimage.de/news/news-de...

At the 19th International GSM CiM-IMPRS Graduate School Meeting 2025 from October 8 to 10, our @nfdi4bioimage.bsky.social colleagues Jens Wendt and Marie Baldenius took the opportunity to get in touch with PhD students, postdocs and group leaders and introduce them to the work of the consortium.

🔬We are looking forward to the #RDM4mic meeting that will take place from October 21-23 at the University of Münster. It is co-organized by @nfdi4bioimage.bsky.social and @gerbi-gmb.de and aims to bring together members of the imaging and #RDM community. Read more: 👉 hackmd.io/@marietoveli...

Making your imaging data #FAIR is your goal as a researcher, but you are not sure how? Learn about good data management practices and strengthen your skills in the hands-on Workshop " #RDM for Microscopy" on November 25 in Münster. Register here: 👉 www.medizin.uni-muenster.de/fakultaet/te...

🌟 #MeetOurDataStewards: #5: Mohsen Ahmadi Good #ResearchDataManagement is essential for keeping large and multidimensional data sets structured and making them #reusable for future research. Our @nfdi4bioimage.bsky.social Data Stewards will be happy to help you: 👉 nfdi4bioimage.de/about-us/dat...

@nfdi4bioimage.bsky.social Task Area Leaders Josh Moore and Christian Tischer will introduce participants to the history and basics of OME-Zarr at the international 2025 OME-NGFF Symposium from November 10–11 in Zurich, SW. Register here: 👉 www.ema.uzh.ch/de/register/... Picture by BioVisionCenter

🌟 #MeetOurDataStewards #5: Mohsen Ahmadi He is a a biochemist and works with image microscopy from plasma medicine at @inpgreifswald.bsky.social. If you need help with organizing your microscopy image data, feel free to contact Mohsen. 👉 nfdi4bioimage.de/about-us/dat...

Save the date for the panel discussion “The Power of Sharing: Open Data in Bioimage Analysis” on October 24, 2025. 🤝 The discussion with experts from various fields related to imaging is organized by Young Microscopists and Image Analysts (YMIA). Register here: 👉 gerbi-gmb.de/machform/vie...

In addition to his work @scadsai.bsky.social, @haesleinhuepf.bsky.social works @nfdi4bioimage.bsky.social as task area leader. Here you can listen to Robert's interview in the podcast series “The Microscopists". 👉 themicroscopists.bitesizebio.com/episodes/rob...

🌟 #MeetOurDataStewards – Highlight Workshop/Publication #4: Vanessa Fuchs Discover I3D:bio's great OMERO training slides, workshop materials and presentations. Valuable resource – not just for us data stewards at @nfdi4bioimage.bsky.social but also for you. Check it out! gerbi-gmb.de/i3dbio/i3dbi...

🌟 #MeetOurDataStewards – Highlight Training Material #4: Vanessa Fuchs Discover #i3dbio’s great OMERO training material: general training slides, workshop material for using #OMERO and help to ensure smooth IT & Core Facility collaboration. 👉 Check it out: gerbi-gmb.de/i3dbio/i3dbi...

Having trouble with fragmented data sets? The workflow „Linking of Research (Meta-)data in OMERO to Foster FAIR Data in #PlasmaScience“ helps to manage images and metadata according to #FAIR principles, combining #Plasma-MDS and #REMBI standards. Find more information here: doi.org/10.5281/zeno...

Do you know #NFDI? 5 Life Science consortia asked that at the #HHU Core Facility Symposium and introduced services and concepts for RDM. NFDI4Immuno, NFDI4Health, @nfdi4plants.bsky.social, @nfdi4microbiota.bsky.social & NFDI4BIOIMAGE showed how #FAIRdata connects disciplines.

Our 3rd quarterly @nfdi4bioimage.bsky.social newsletter is out! Find information on the last months' political and strategic developments, links to important papers, recordings and training material as well as an overview of upcoming events. To the newsletter: 👉 nfdi4bioimage.de/community-in...

🌟#MeetOurDataStewards: #4: Vanessa Fuchs In today's blog post, Vanessa tells you about her first steps toward making her data reusable. In the end, the data was accessible, annotated, and reusable and her colleague was able to reanalyze it. 👉 Find out more: nfdi4bioimage.de/news/news-de...

What to do if you have extraordinary size data but no extraordinary local memory? 😱 At the @grcib2025.bsky.social, @joshmoore.bsky.social addressed this issue in the talk “When Data Doesn’t Fit – A Bioimaging Story from Files to FAIR”. 👉 Interested? zenodo.org/records/1708...

🌟 #MeetOurDataStewards #4: Vanessa Fuchs Vanessa believes that #OpenScience and #DataManagement make it easy to share #Data with others, publish it in repositories, and enable researchers to reuse it. This adds value for the scientific community and ensures the sustainable use of public funding.

✍ If you're having difficulty writing #BioimageAnalysis code that enables others to follow your workflow, have a look at @haesleinhuepf.bsky.socials slides on „Reproducible Bio-Image Analysis using Python, Napari, Jupyter and AI“ from the #EMBOlsm25. To the slides: 👉 doi.org/10.5281/zeno...

Im nächsten #NFDITalk geht es um "Datenschutz, Wissenschaft und Forschung – Widerspruch oder Chance?". 🗓️ 15.09., 16 Uhr 🎤 Sprecher: Tino Melzer, Landesdatenschutzbeauftragter für Thüringen ➡️ YouTube: www.youtube.com/live/ovyXGR5... ➡️ Zoom: www.nfdi.de/talks #FDM #RDM #NFDI #forschungsdaten

🌟#MeetOurDataStewards Community Support #4: Vanessa Fuchs She works at the Center for Advanced Imaging at @hhu.de and can help with any queries about organizing your data and annotating it with #Metadata in #OMERO. Feel free to contact her if you need help! 👉 nfdi4bioimage.de/about-us/dat...

Interested in data management in microscopy not only in the light but also in the electron (microscopy) world? Chat with Conni Wetzker at the shared booth (No. 57) of @nfdi4bioimage.bsky.social, @fairmat.bsky.social and MatWerk at the #MC2025 in Karlsruhe. To our poster: zenodo.org/records/1701...

#CoRDI2025 came to an end as a big success. Shoutout to @nfdi.de & WZL @rwth.bsky.social for a great event. Some of us look ahead to participate in the #Base4NFDI user conference. Others drive home reaffirmed once more in our enthusiasm to embrace FAIR data & tackle challenges for our community.

🌟#MeetOurDataStewards #3: Riccardo Massei Riccardo's first project as a Data Steward at @nfdi4bioimage.bsky.social involved managing and publishing an HCS zebrafish dataset by using the #VAST Bio-Image platform and #OMERO. 🐟 👉 nfdi4bioimage.de/news/news-de...

Julia Thönnißen from @fz-juelich.de demonstrates how large-scale 3D imaging data from neuroscience research can be handled & analyzed without the need for data duplication. Leveraging #OME-Zarr, the #tiamat tool developed at FZJ enables seamless work at scale. @nfdi4bioimage.bsky.social #CoRDI2025

The #CoRDI2025 is an excellent opportunity for exchange with fellow consortia & many initiatives building research data infrastructure for excellent science. Come find @nfdi4bioimage.bsky.social at the Market of Oppurtunities on the ground floor of C.A.R.L building to learn about our services.

An enlightening opening keynote by Rob Finn from @ebi.embl.org at #CoRDI2025 in Aachen. Among others, he highlighted the rapid growth of data in the field of imaging as well as challenges of data handling and sharing across scales and technologies. Looking forward to an exciting conference ahead.

We're happy to announce the 2025 International OME-NGFF workshop 🎉 📅 Dates: - Symposium: Nov 10–11, 2025 - Hackathon: Nov 12–14, 2025 📍 Location: Zurich, Switzerland Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...  #bioimaging #openscience #OMENGFF #OMEZarr (1/x 🧵)

Amazing talk by Björn Grüning from @galaxyproject.bsky.social @uni-freiburg.de & task area leader @nfdi4bioimage.bsky.social on the power of Galaxy. Cloud-deployed workflows as a basis for reuse across domains. An example? Voronoi segmentation in bioimaging, forest imagery & astronomy. #CoRDI2025 👏

Large, complex data require the right environments to handle and process. Dirk v. Suchodoletz and his team create an open source virtual desktop infrastructure fit for bioimage data and more. @nfdi4bioimage.bsky.social @nfdi4plants.bsky.social #CoRDI2025

How to make bioimage analysis workflows #FAIR? Riccardo Massei shows how to use efficient RDM & analysis pipelines in #Galaxy. As a @nfdi4bioimage.bsky.social Data Steward, Riccardo supports the community with expertise in data handling for high-content screening, image analysis & more. #CoRDI2025

Find Robert Wagner on the ground floor level or C.A.R.L at the #CoRDI2025 conference to learn how #OMERO helps with #FAIR data management in the field of low-temperature plasma science. @inpgreifswald.bsky.social @nfdi4bioimage.bsky.social

Poster Session at #CoRDI2025. Here is @joshmoore.bsky.social presenting how cloud-ready next-generation file formats like #OME-Zarr enable federated repositories with large N-dimensional arrays at peta-scale. #OME-NGFF @nfdi4bioimage.bsky.social Find the poster on C.A.R.L level 2 @rwth.bsky.social

Today starts the second edition of #CoRDI2025, with numerous keynotes, poster sessions and lectures on #ResearchData Infrastructure @rwth.bsky.social. We look forward to a lively exchange and wish all participants an entertaining and informative time. ✨ 👉 www.nfdi.de/cordi-2025/

🌟 #MeetOurDataStewards #3: Riccardo Massei Riccardo believes that managing data in a #FAIR way is essential to scientists' daily work. If you need assistance with #FAIR data management the @nfdi4bioimage.bsky.social Data Stewards are available to provide guidance. 👉 nfdi4bioimage.de/about-us/dat...

Interested in #bioimaging and #datascience? The "Bio-Image Data Science Lectures 2025 @unileipzig.bsky.social / @scadsai.bsky.social" by @haesleinhuepf.bsky.social offer theory and practice on #Python, #machinelearning, #deeplearning, #LLMs, and research data. 📝 zenodo.org/records/1585...

My tutorial materials & slides about #Reproducible #BioImageAnalysis using Python, Napari, Jupyter and #AI are available #openaccess. Thanks to #EMBOlsm25 for having me! It so great to visit friends at my former academic home campus for a couple of days 🤩 scads.github.io/embo-lsm-bia...

NFDI4BIOIMAGE members at INP Greifswald showcase a “Bioimaging workflow based on OMERO, eLabFTW, and Adamant for integrating images with multimodal metadata” to bridge image metadata and experimental records, embracing the #FAIR principles & open-source software. 👉 zenodo.org/records/1656...

🌟 #MeetOurDataSteward: #3: Riccardo Massei #DataSteward at NFDI4Bioimage and researcher @ufz.de. He makes high-content screening data FAIR and cloud-ready using #OMERO, #Python, #Galaxy, and #Jupyter. Questions? Get in touch! 👉https://nfdi4bioimage.de/about-us/data-stewardship-team/massei/

At #CoRDI2025 in Aachen (August 26–28), #NFDI4BIOIMAGE will present posters on cloud-based data infrastructure, automation, #FAIR principles, interoperability, and user-friendly analysis environments for the #bioimaging community. 👉 You can find the #CoRDI2025 program here: www.nfdi.de/cordi-2025/

🌟 #MeetOurDataStewards – Highlight Workshop/Publication #2: Jens Wendt You want to expand your knowledge in the field of bioimage analysis? Gain insights into current and emerging developments in the @globias.bsky.social seminar series. To the GloBIAS Youtube channel: 👉 www.youtube.com/@GloBIAS

🌟 #MeetOurDataStewards: #2: Jens Wendt Data steward Jens Wendt shares with us the challenges encountered with an example request he received and how a solution was found and implemented together with the research group. Have a look at Jens' work as a data steward: 👉 nfdi4bioimage.de/news/news-de...

🎉 A detailed program for #CoRDI2025 is now available and we are happy to announce that @nfdi4bioimage.bsky.social will be represented with various exciting contributions from August 26 to 28 in Aachen. Take a look and see if you can find us in the program: 👉 www.nfdi.de/cordi-2025/

🌟 #MeetOurDataStewards – Why does #OpenScience matter? #2: Jens Wendt “With opening your data up to the public and up to your colleagues, you enable synergies that you might not even think about.”, says Jens Wendt. The @nfdi4bioimage.bsky.social data stewards will help you make your data accessible.

🌟 #MeetOurDataSteward: #2: Jens Wendt, #DataSteward at @nfdi4bioimage.bsky.social and the Imaging Network at @uni-muenster.de. Jens will happily help you with administration and development around #OMERO, Python, image data management and image analysis tools. 🧰 👉 nfdi4bioimage.de/about-us/dat...

Many thanks to the @ebi.embl.org for inviting our @nfdi4bioimage.bsky.social colleagues @sweidtkamp.bsky.social, @tom-bssnnt.bsky.social and @schmchris.bsky.social to give insights into the journey to #FAIR bioimage data. Find the recording of the webinar here: 💻 www.youtube.com/watch?v=7nj2...