We’re very excited to finally share our latest work: Phyloformer 2, a deep end-to-end phylogenetic reconstruction method: arxiv.org/abs/2510.12976 Using neural posterior estimation, it outperforms Phyloformer 1 and maximum-likelihood methods under simple and complex evolutionary models. 🧵1/17

Our preprint on our new metagenomic HiFi assembler Alice is out 🥳 Based on a *new sketching method* (🧵1/6) 👉 Preprint www.biorxiv.org/content/10.1... 👉 Github github.com/rolandfaure/...

La vidéo sur notre projet de recherche est en ligne ! Merci encore à toute l'équipe d'animal pensant pour leur incroyable travail ! D’où viennent les fleurs ? lejournal.cnrs.fr/videos/dou-v...

All this work was done by Luca Nesterenko and @lblassel.bsky.social , assisted by P. Veber, Bastien Boussau and myself. The code and data are available at github.com/lucanest/Phy... Please share if you find this interesting, and we welcome your feedback :)

We just released a preprint for Phyloformer, a likelihood-free inference method for phylogenetic reconstruction: biorxiv.org/content/10.1... Faster than distance methods like neighbor joining, it outperforms maximum likelihood methods under complex models of sequence evolution. 🧵