A lot is changing with our documentation, including a transition from a single-source to multiple sources. Learn more in this News post on the forum: forum.qiime2.org/t/the-qiime-... #qiime2 #bioinformatics #documentation #jupyterbook

I guess I’ll start off on here with my last tweet? I’m pleased to share my new preprint with @betascience.bsky.social, where we introduce a new database for PICRUSt2 functional predictions. www.biorxiv.org/content/10.1...

In a spot of happy news, our lab published a new method for kmer-based microbial diversity analysis! The @qiime2.org plugin q2-kmerizer is now out in @asm.org's mSystems 🎉 Check it out #MicroSky and 🖥️🧬 communities interested in #microbiome #bioinformatics: doi.org/10.1128/msys...

For the QIIME 2 developers out there, here are the dependency version changes you can expect to see in the upcoming 2025.4 release - reach out if you need help updating your plugins! forum.qiime2.org/t/qiime-2-20...

This announcement is a little late (we're just starting to use bluesky), but #QIIME 2 2024.10 was release this October! Lots of exciting new features with many more still on the way! forum.qiime2.org/t/qiime-2-20... #microbiome #bioinformatics #microbiomesky

Do you use Zenodo for archiving QIIME 2 data for publications? We now support loading QIIME 2 Results (Artifacts and Visualizations) directly from Zenodo with QIIME 2 View. Check out the links in this Zenodo record, which references data from a new @cap-lab.bio pub: doi.org/10.5281/zeno...

Happy Monday! Start your week off w/ a new QIIME 2 release: @qiime2 2024.2. There's a lot in this one, including new parallel actions in the shotgun distribution, a fancy new visualizer (summarize-plus), for summarizing feature tables & performance enhancements and minor fixes throughout. Enjoy!

QIIME 2 Provenance Replay auto-generates the code for creating QIIME 2 results from QIIME 2 results & builds "bioinformatics reproducibility supplements" for your papers. Our goal is to make it easy for you to perform reproducible, replicable & robust bioinformatics. doi.org/10.1371/jour...

#QIIME2 2023.9 is now available! Exciting updates include an alpha release of our shotgun #metagenomics distribution, fully integrated provenance replay within the framework, batched decontam analysis, and more! Thank you contributors!! forum.qiime2.org/t/qiime-2-20...