Santiago Claramunt
@sclaramunt.bsky.social
📤 319
📥 225
📝 14
Studying the macro eco-evolutionary dynamics of birds.
https://claramuntlab.org
reposted by
Santiago Claramunt
Thomas R. Holtz, Jr.
2 days ago
How many mammal species are there now? Updates and trends in taxonomic, nomenclatural, and geographic knowledge url:
academic.oup.com/jmammal/arti...
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How many mammal species are there now? Updates and trends in taxonomic, nomenclatural, and geographic knowledge
The Mammal Diversity Database 2.0, listing 6,759 mammal species and 50,230 species-level synonyms, unifies 267 yr of taxonomic, nomenclatural, and geograph
https://academic.oup.com/jmammal/article/doi/10.1093/jmammal/gyaf047/8253815
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Santiago Claramunt
Extreme Temperatures Around the World
3 days ago
SOUTH AMERICA HEAT WAVE Brutally hot night in PARAGUAY🇵🇾: Minimums up to 28.6C, but next night is the goat.. and can be the hottest September night in all Hemisphere history ! In ARGENTINA🇦🇷 Monthly record broken at Oran with 42.3C Tomorrow will be historic
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Santiago Claramunt
Joanna Masel
7 days ago
Our new paper
@asn-amnat.bsky.social
develops a Grand Unified Theory including both exploitative and interference competition
doi.org/10.1086/737628
. The R* rule of ecology (that 2 species cannot coexist on a single resource), is widely broken, including via a new trade-off we describe. 1/9
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A Mechanistically Integrated Model of Exploitative and Interference Competition over a Single Resource Produces Widespread Coexistence | The American Naturalist
Abstract Many ecological models treat exploitative competition in isolation from interference competition. Corresponding theory centers around the R* rule, according to which consumers that share a si...
https://doi.org/10.1086/737628
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Santiago Claramunt
Royal Society Publishing
about 1 month ago
New from
#BiologyLetters
: Combining fossil taxa with and without morphological data improves dated phylogenetic analyses
buff.ly/abJm5Zv
|
#Evolution
#Palaeontology
#Taxonomy
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Santiago Claramunt
Marie Monniaux
11 days ago
Check out this cool work from
@crouxevo.bsky.social
and others, congrats!!! 🥳 Rapid establishment of species barriers in plants compared with that in animals | Science
www.science.org/doi/10.1126/...
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Rapid establishment of species barriers in plants compared with that in animals
Speciation, the process by which new reproductively isolated species emerge from ancestral populations, results from the gradual accumulation of barriers to gene flow within genomes. To date, the noti...
https://www.science.org/doi/10.1126/science.adl2356
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Santiago Claramunt
BOU
11 days ago
An Intergeneric Hybrid Between Historically Isolated Temperate and Tropical Jays Following Recent Range Expansion |
doi.org/10.1002/ece3...
| Ecology and Evolution |
#ornithology
🪶
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Patrick McKenzie
12 days ago
super excited to share this big project with
@daeaton.bsky.social
out now in Systematic Biology! We derived distributions for -- given an arbitrary species tree model -- how far you have to move along a genome before observing a change in the underlying genealogy:
doi.org/10.1093/sysb...
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Estimating waiting distances between genealogy changes under a Multi-Species Extension of the Sequentially Markov Coalescent
Abstract. Genomes are composed of a mosaic of segments inherited from different ancestors, each separated by past recombination events. Consequently, genea
https://doi.org/10.1093/sysbio/syaf059
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Santiago Claramunt
Josef Uyeda
4 months ago
Unsolicited listicle: My list of the most criminally underused/underappreciated phylogenetic comparative methods. Note, I am not involved in ANY of these methods; but I see them as things people are often asking of comparative data but have been surprised at how infrequently they have been cited.
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Excited to share our new paper on flight morphology and migration in North American wood warblers. Surprisingly, ground-dwelling warblers may be better adapted for migration than aerial ones!!!
link.springer.com/article/10.1...
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Morphological adaptations for migration in North American wood-warblers (Aves: Parulidae) - Journal of Ornithology
Migration exerts a selective pressure for increased flight efficiency and reduced energy expenditure in long-distance migratory birds. In North America, eastern migratory flyways are longer and requir...
https://link.springer.com/article/10.1007/s10336-025-02324-x
13 days ago
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Santiago Claramunt
Cody Limber
28 days ago
My feather cell type paper is finally out!
doi.org/10.1111/ede....
We’ve packed a ton of stuff into this paper but I’ll go through some highlights in this thread!
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Genetic Characterization of the Cell Types in Developing Feathers, and the Evolution of Feather Complexity
We used single cell sequencing to investigate the cell types of developing chicken feathers. From these data, we are able to describe the transcriptional profile of feather cell types, look at their ....
https://doi.org/10.1111/ede.70016
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Santiago Claramunt
Alberta Claw
30 days ago
Ecomorphology of the bird lumbosacral organ:
onlinelibrary.wiley.com/doi/10.1002/...
🪶🧪 (📷Pelletan et al.)
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Santiago Claramunt
Molecular Biology and Evolution
about 1 month ago
C. Zhang, R. Nielsen and S. Mirarab integrate all ASTRAL-like methods into a single package called ASTER, comprising several tools that collectively enhance the scalability, accuracy, and versatility of species tree inference. 🔗
doi.org/10.1093/molbev/msaf172
#evobio
#molbio
#compbio
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ASTER: A Package for Large-Scale Phylogenomic Reconstructions
Abstract. Many algorithms are available for inferring species trees from various input types while accounting for gene tree discordance. Several quartet-ba
https://doi.org/10.1093/molbev/msaf172
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Santiago Claramunt
Martin A. Nuñez
about 1 month ago
🚨Big news🚨 A Pocket Guide to Scientific Writing and Publishing is out🎉 This is the book I wish I’d had 20 years ago — short, practical, and designed to help researchers write & get their papers published I hope it helps many Please share with anyone who might benefit! 👉
mybook.to/ScienceGuide
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Santiago Claramunt
Jeremy M. Brown
about 1 month ago
Registration is now open for
#SSB2026
! I'm so excited to see many of you here in Baton Rouge in January! We're going to hear great talks, discuss the immeasurable value of natural history collections, and continue to strengthen our scientific community.
ssb2026.github.io
@systbiol.bsky.social
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Santiago Claramunt
BOU
about 1 month ago
Linking performance to powerhouse: mitochondrial aerobic metabolism in blood cells reflects flight endurance of house sparrows (Passer domesticus) |
royalsocietypublishi...
| Biology Letters |
#ornithology
🪶
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Santiago Claramunt
Gustavo A. Bravo
about 1 month ago
royalsocietypublishing.org/doi/10.1098/...
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Prevalence and implications of sex reversal in free-living birds | Biology Letters
The ability to unequivocally identify the sex and reproductive status of individuals is crucial across many fields of study. Recent evidence indicates that avian sex determination is more flexible tha...
https://royalsocietypublishing.org/doi/10.1098/rsbl.2025.0182
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Santiago Claramunt
W. P. Mueller
about 1 month ago
#ornithology
www.nature.com/articles/s41...
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Large reductions in tropical bird abundance attributable to heat extreme intensification - Nature Ecology & Evolution
Climate change poses a growing threat to biodiversity, but disentangling its overall impact from other anthropogenic stressors is challenging. Here the authors use a data-driven climate attribution fr...
https://www.nature.com/articles/s41559-025-02811-7
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Santiago Claramunt
Wilson Ornithological Society
about 1 month ago
A recent study of seabird collisions with human-made structures published in the WJO turned up over 400 such incidents, involving seabirds including pelicans, gulls, and even albatrosses.
#ornithology
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Guest Post – Anthropogenic Structures: Unseen Killers of Seabirds
Collisions with anthropogenic structures may pose an underappreciated threat to seabird populations.
https://wilsonsociety.org/2025/07/28/guest-post-anthropogenic-structures-unseen-killers-of-seabirds/
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Santiago Claramunt
Ecography
about 2 months ago
Shape-shifting in relative wing length of juvenile shorebirds: no evidence of developmental temperatures driving morphological changes
vist.ly/32exv
#BodyMass
#Morphology
#ShoreBirds
#WingLength
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Santiago Claramunt
Andrej Spiridonov
about 2 months ago
Exhilarating to see organismal agency in evolution at such a large scale! Organisms chose where to live and what to eat, and only after tens of thousands of generations and after much later speciation events the efficiency was achieved
www.science.org/doi/epdf/10....
🧪 ⚒️
#Geology
#Paleobio
#EvoBio
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reposted by
Santiago Claramunt
about 2 months ago
Our new review on numerical cognition in birds, just out in Nature Reviews Psychology! 🐦🧠 Behavior, neurobiology & field studies across avian species Very fond of the neurobiology part :) 📖 Read it here:
rdcu.be/eyErI
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Numerical cognition in birds
Nature Reviews Psychology - Birds demonstrate complex numerical abilities at levels similar to primates. In this Review, Regolin and colleagues describe the contribution of laboratory, field and...
https://rdcu.be/eyErI
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reposted by
Santiago Claramunt
American Naturalist / ASN 🐌
about 2 months ago
How Randomness Can Flip Evolution: New Study Uncovers Surprising Role of Population Noise Summary & Analysis by Tahirah Williams of “Eco-Evolutionary Dynamics for Finite Populations and the Noise-Induced Reversal of Selection” by Bhat et al.
www.amnat.org/an/newpapers...
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Santiago Claramunt
Gates Dupont
about 2 months ago
🚨 First PhD chapter is out! My work thus far, with
@andy2dobson.bsky.social
We found that formerly common species have declined the fastest, on average. 📄 North American bird declines are driven by reductions in common species | Science Advances
www.science.org/doi/10.1126/...
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North American bird declines are driven by reductions in common species
Declines in North American birds are driven not by rare species vanishing but by sharp losses among formerly common species.
https://www.science.org/doi/10.1126/sciadv.adw8971
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Santiago Claramunt
Joseph Tobias
about 2 months ago
🚨 The New Age of global bird phylogenies continues! Hot on the heels of the fantastic updated tree created by
@eliotmiller.bsky.social
and others, we use a different approach to generate a near-comprehensive timetree of >9000 bird species. 1/3
www.cell.com/current-biol...
🧪🌐🪶
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A new time tree of birds reveals the interplay between dispersal, geographic range size, and diversification
Flight may affect the dispersal and evolution of birds. Using a new evolutionary tree, Claramunt et al. find that efficient fliers have broader geographic ranges, and speciation reduces range size, bu...
https://www.cell.com/current-biology/fulltext/S0960-9822(25)00870-X
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Santiago Claramunt
Catherine Sheard
about 2 months ago
Not to state the obvious, but some birds fly better than others. The ones that are awesome at flying -- this means they can get around obstacles, right? Expand their ranges as needed? Maybe be a little less vulnerable to extinction? Turns out it's SUPER complicated.
www.cell.com/current-biol...
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A new time tree of birds reveals the interplay between dispersal, geographic range size, and diversification
Flight may affect the dispersal and evolution of birds. Using a new evolutionary tree, Claramunt et al. find that efficient fliers have broader geographic ranges, and speciation reduces range size, bu...
https://www.cell.com/current-biology/fulltext/S0960-9822(25)00870-X
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Happy to share our latest paper in which we use a new big phylogeny of birds to analyze the relationships between dispersal, geographic range size and diversification rates across all birds. See also post by @sheardcat.bsky.social and
@josephtobias.bsky.social
www.cell.com/current-biol...
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A new time tree of birds reveals the interplay between dispersal, geographic range size, and diversification
Flight may affect the dispersal and evolution of birds. Using a new evolutionary tree, Claramunt et al. find that efficient fliers have broader geographic ranges, and speciation reduces range size, bu...
https://www.cell.com/current-biology/fulltext/S0960-9822(25)00870-X
about 2 months ago
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Santiago Claramunt
BOU
about 2 months ago
Enlargement of sternum traits facilitated the evolution of powered flight in birds |
www.nature.com/artic...
| Nature Ecology and Evolution |
#ornithology
🪶
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reposted by
Santiago Claramunt
Wilson Ornithological Society
about 2 months ago
There's a new guest post on the WOS blog! Riley Lawson describes the backstory of his recent paper in The Wilson Journal of
#Ornithology
, which documents the underappreciated threat that collisions with anthropogenic structures pose to
#seabirds
.
wilsonsociety.org/2025/07/28/g...
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Santiago Claramunt
PuckerLab publications
about 2 months ago
Tracing the evolutionary and genetic footprints of atmospheric tillandsioids transition from land to air
doi.org/10.1038/s414...
#PlantGenomics
#Evolution
#Phylogenomics
#Tillandsioideae
#Bioinformatics
#Systematics
#BigData
#PlantSci
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Tracing the evolutionary and genetic footprints of atmospheric tillandsioids transition from land to air - Nature Communications
The mechanisms by which tillandsioids adapt to elevated aerial habitats remain largely unexplored. Here, the authors report their evolution and link life history, diversification, comparative genomic,...
https://doi.org/10.1038/s41467-024-53756-7
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reposted by
Santiago Claramunt
Luisa F. Pallares
2 months ago
Quedan tres semanas para aplicar al Taller Suraméricano de Biología Evolutiva en Uruguay (nov 23-29) Todos los gastos pagos para estudiantes, gracias a la financiación del
@sse-evolution.bsky.social
@eseb.bsky.social
@asn-amnat.bsky.social
#CienciaCriolla
Info aquí:
sites.google.com/view/evosur2...
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Santiago Claramunt
Jente Ottenburghs | Avian Hybrids
2 months ago
Your daily Avian Hybrids story! A genetic model for punctuated equilibria
avianhybrids.wordpress.com/2020/01/23/a...
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A genetic model for puntuated equilibria
Using a combination of developmental genes and transposable elements to explain patterns in the fossil record.
https://avianhybrids.wordpress.com/2020/01/23/a-genetic-model-for-puntuated-equilibria/
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Santiago Claramunt
Alberta Claw
2 months ago
Evolution of the sternum (breastbone) in birds and other pennaraptoran dinosaurs:
www.nature.com/articles/s41...
🪶🧪 (📷
@talialm.bsky.social
et al.)
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Thrilled to share the final chapter of @talialm.bsky.socia’s dissertation — just published! This paper is the capstone of her PhD work and a major contribution to our understanding of the early evolution of birds and flight. 🦅 Way to go, Talia! 🥳
add a skeleton here at some point
2 months ago
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Santiago Claramunt
Gustavo A. Bravo
2 months ago
Have you ever wondered about the origin of birds restricted to specific regions? Led by doctoral student Hevana Lima, we attempt to unravel the origins of birds endemic to the Caatinga dry forests in Brazil. Check our ms out!
onlinelibrary.wiley.com/doi/10.1111/...
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Origins and Diversification of the Caatinga Dry Forest Endemic Avifauna
Aim Understanding the geographic origin of lineages is critical to comprehending their biogeographical and evolutionary histories and the historical connections among biomes. In northeastern Brazil,...
https://onlinelibrary.wiley.com/doi/10.1111/jbi.70003?af=R
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Santiago Claramunt
Journal of Avian Biology
2 months ago
IN-DEPTH: Read the short blogpost and watch the video by
#PedroSaezGomez
about how to use a GPS/VHF tag with a soluble backpack harness to track small, elusive birds. blog ➡️
vist.ly/3ypes
instruction video ➡️
vist.ly/3ypev
#ornithology
#birds
#tracking
#VHF
#lightweight
#gps
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Overcoming technological constraints in the tracking of small, elusive birds | Journal of Avian Biology
Overcoming technological constraints in the tracking of small, elusive birds | Journal of Avian Biology
https://www.avianbiology.org/blog/overcoming-technological-constraints-tracking-small-elusive-birds
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Santiago Claramunt
Sara Lipshutz (she/her)
5 months ago
Now published!!!!
www.nature.com/articles/s41...
add a skeleton here at some point
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Santiago Claramunt
Genetics Society of America
2 months ago
In
#GENETICS
,
@3rdreviewer.bsky.social
and
@smishra677.bsky.social
show it is possible to estimate recombination solely using the allele frequency spectrum and provide a genealogical interpretation of the results, showing how
#MachineLearning
can provide insights into biology.
buff.ly/emixz9W
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Santiago Claramunt
Andy J. Green
2 months ago
Our latest paper "Trait-based selection of seeds ingested and dispersed by North American waterfowl" is on the cover of Plants
#seeddispersal
#ducks
#endozoochory
#waterfowl
@ebdonana.bsky.social
@mdpiopenaccess.bsky.social
www.mdpi.com/2223-7747/14...
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Santiago Claramunt
Journal of Avian Biology
3 months ago
#ornithology
#birds
#radiotracking
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Santiago Claramunt
Wayne Maddison
3 months ago
A short Quick Tip video showing how to concatenate and deconcatenate matrices in Mesquite 4.
youtu.be/1etP6D3SrdE
🧪
#evolbio
@bembidion.bsky.social
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Concatenating and deconcatenating matrices in Mesquite 4
YouTube video by Mesquite ProjectTeam
https://youtu.be/1etP6D3SrdE
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Santiago Claramunt
Martin Stervander 🏳️🌈🇸🇪🏴🏛️🦉🦤🪶
3 months ago
Welcome a new family of
#birds
, the Caribbean cave rails, Nesotrochidae! They were—surprisingly—the sisters of NZ adzebills, all sadly extinct. New
#OpenAccess
paper out in Avian
#Systematics
w Gerald Mayr, Chen Guangji & Feng Shaohong:
www.avespress.com/uploads/down...
🧵
#ornithology
#taxonomy
🧪🪶
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Santiago Claramunt
𝙱𝙰𝚂𝙰𝙽𝚃𝙰 𝙺𝙷𝙰𝙺𝚄𝚁𝙴𝙻
3 months ago
🆕 Preprint now on bioRxiv! We introduce a covarion model for phylogenetic inference using discrete morphological data, addressing lineage- and character-specific rate heterogeneity.
www.biorxiv.org/content/10.1...
#phylogenetics
#morphology
#covarion
#evolution
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A covarion model for phylogenetic estimation using discrete morphological datasets
The rate of evolution of a single morphological character is not homogeneous across the phylogeny and this rate heterogeneity varies between morphological characters. However, traditional models of mo...
https://www.biorxiv.org/content/10.1101/2025.06.20.660793v1
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Santiago Claramunt
Journal of Avian Biology
3 months ago
NEW PAPER: Flying stimulates the antioxidant system and protects against oxidative damage in a migratory songbird, yet diet quality has little effect on oxidative status. ➡️
vist.ly/3n728fb
#ornithology
#birds
#oxidativestress
#migration
#flight
#antioxidants
#physiology
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Santiago Claramunt
Wayne Maddison
3 months ago
Mesquite 4.0 released! A major update — many new features, small and large (phylogenomics, visualizations, workflow management, &c). Check out the trailer video:
www.mesquiteproject.org
. Come discuss in our new Google Group (
groups.google.com/g/mesquite-project
).
@bembidion.bsky.social
🧪
#evolbio
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Santiago Claramunt
Wilson Ornithological Society
3 months ago
Online early in the WJO: Minor mist-net injuries do not affect apparent annual survival in Cliff Swallows.
#ornithology
www.tandfonline.com/doi/full/10....
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Santiago Claramunt
Kyle T David
4 months ago
How many paths lead to evolutionary innovation? How versatile are genomic toolkits? Excited to announce my new
@pnas.org
paper addressing these questions in collaboration with
@rokaslab.bsky.social
,
@hittingerlab.bsky.social
, and the Pennell lab!
www.pnas.org/doi/10.1073/...
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Oikos
3 months ago
💥📉Ignite: Biomass and abundance trends diverge as the North American avifauna undergoes widespread demographic declines
vist.ly/3n77wjc
#BiomassFlux
#BiomassTrends
#CommunityRestructuring
#EcosystemFunction
#ThreeBillionBirds
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Santiago Claramunt
Graham Coop
3 months ago
Line up of talks by Coop lab folks
#Evol2025
(do double check times):
@kitchensjn.bsky.social
Reconstructing the spatial histories of populations from ancestral recombination graphs June 21st Sat. 2:45 PM. Population Genetic Theory III. 1/n
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I’m recruiting graduate students to join my lab at the University of New Orleans starting in January or September 2026! If you're at
#Evol2025
and curious about my research, come to my talk on Saturday at 11:30 AM in Macroevolution & Diversification II. Contact me if interested.
claramuntlab.org
3 months ago
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