Rachel Colquhoun
@rmcolq.bsky.social
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Bioinformatics for metagenomics and viral sequence data
reposted by
Rachel Colquhoun
Kristian G. Andersen
6 months ago
Amazing work from our colleagues in Sierra Leone, Nigeria, and elsewhere, making the first sequences available from the ongoing Mpox epidemic in Sierra Leone. More to come - for now, head over to
@pathoplexus.org
:
pathoplexus.org/seqsets/PP_S...
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Pathoplexus | SeqSets
Pathoplexus is a new, open-source database dedicated to the efficient sharing of human viral pathogen genomic data, fostering global collaboration and public health response.
https://pathoplexus.org/seqsets/PP_SS_169.1
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reposted by
Rachel Colquhoun
Edinburgh Infectious Diseases
7 months ago
Delighted to see launch of ARTIC-2 project - colleagues
@aineotoole.bsky.social
@arambaut.bsky.social
and
@rmcolq.bsky.social
working with
@pathogenomenick.bsky.social
@articnetwork.bsky.social
to develop low-cost pathogen genome sequencing 🧪🦠🧫
edinburgh-infectious-diseases.ed.ac.uk/news-and-eve...
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reposted by
Rachel Colquhoun
Nick Loman
7 months ago
Absolutely thrilled to announce the launch of ARTIC2 - a £5.5M 5 year project funded by
@wellcometrust.bsky.social
to build on the ARTIC approach of low-cost, globally accessible genome sequencing for surveillance of outbreaks, epidemics and endemic diseases:
www.birmingham.ac.uk/news/2025/am...
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Ambitious project to develop low-cost genome sequencing for pathogens known and unknown - University of Birmingham
Project will build on research that helped diagnostic labs to adopt sequencing capacity for COVID-19 and permit characterisation of future infectious threats
https://www.birmingham.ac.uk/news/2025/ambitious-project-to-develop-low-cost-genome-sequencing-for-pathogens-known-and-unknown
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