Making structural biology data accessible to everyone — from specialists to first-time explorers. ✨ Discover the new interactive, personalised & mobile-ready PDBe Entry Pages. 📖 Read more: www.ebi.ac.uk/about/news/u... 🔍 Try it: www.ebi.ac.uk/pdbe/entry/p...

🧪 We're beta testing – and we want your thoughts! Try the new PDBe-KB Complex pages and let us know: 🔸 What’s working? 🔸 What’s confusing? 🔸 What features are lacking 💬 Feedback form: tinyurl.com/pdbekb-compl... #PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science

What can you do with PDBe-KB Complexes (beta)? 🗂️ Unified view of PDB assemblies 🧬 Standardised annotations 📊 Structural metrics and interactive visualisations 🔗 wwwdev.ebi.ac.uk/pdbe/pdbe-kb... #PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science

🔬 Structural biologists, help us improve the PDBePISA server! Fill in a 6-minute survey about your experience with PDBePISA forms.gle/PfoCYHJe1y9L...

🚀 PDBe-KB Complexes (beta) is now live! Same macromolecular complex. Different experimental conditions. All assemblies in one place. 🔍 Try the beta now: wwwdev.ebi.ac.uk/pdbe/pdbe-kb... #PDBeKB #Complexes #Bioinformatics #StructuralBiology #Science

🚨 Unifying PDBe API endpoints- Breaking changes to PDBe API 🚨 PDBe brings new updated REST API endpoints that fully replicates the functionality of the old service, while introducing performance enhancements and additional endpoints. ⬇️ Read more⬇️ www.ebi.ac.uk/pdbe/news/un...

A poster from the PDBe team viewable Thursday & Friday at #ECM35 🧪 MS6_P7 - Building a FAIR Repository for Fragment-Based Screening Campaigns - Presented by Genevieve Evans All ECM poster titles & abstracts available here: 🔗 ecm35.ecanews.org/poster-hiper... #Biology #Chemistry

🔬 PDBe is excited to be at #ECM35, in Poznan, Poland 🤍❤️, joint hosted by Lviv, Ukraine 💙💛! 2026 PDBArt calendars 🎨🗓️ available. 🔗 www.ebi.ac.uk/pdbe/pdb-art Crystallography continues to unlock the secrets of biomolecular structures! #Biology # Chemistry

CATH turns 30 years old this year! We are organising a 1-day symposium on September 16th at UCL, highlighting recent AI-based developments to enhance protein family classifications, annotations and analyses. www.eventbrite.co.uk/e/protein-an...

Every annotation is traceable to its publication 📄. Open the PubMed link and delve even deeper. Download annotations through our API. Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p... #PDBeBeta #OpenScience #ProteinData #AnnotationsAPI #ARISE #IUCr

📄 New paper: 3DEM Structure Map Validation Recommendations Two new metrics assess model-to-map fitness in cryo-EM: 🔹 Q_relative_all → compares avg Q-score across PDB/EMDB 🔹 Q_relative_resolution → compares within similar resolution #3DEM #CryoEM #wwPDB

Explore 🧭 a residue’s structural environment in the context of its linked annotations. Colour-coding 🖍️ residues in the sequence points you to places of interest, go and discover. Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p... #PDBeBeta #ResidueLevelInsights #PDBeValidation #ARISE #IUCr

We’ve listened! Thanks to your feedback on last week’s AlphaFold DB redesign, we have ✅ Added interactive sequence navigation ✅ Made downloads faster clearer ✅ Listed the PDB coordinate file as its own option Keep the feedback coming 🔗 alphafold.ebi.ac.uk/entry/P09958

Click on a residue in the sequence viewer or 3D Mol* viewer and watch everything sync! 🎯 Just like magic ✨ — all while zooming in on the structure in real-time. Try yourself: wwwdev.ebi.ac.uk/pdbe/entry/p... #PDBeBeta #Molstar #Bioinformatics #ResidueLevelInsights #ARISE #IUCr

🧬 🔨 Residue-level insights powered by AI. Explore insight for specific amino acids from primary literature #TextMining 🔍 Check out the ⭐ Text Annotations (AI) ⭐ tab on the new #PDBeBeta pages! 🔗 wwwdev.ebi.ac.uk/pdbe/entry/p... #AIinBiology #Biology #Science #ARISE #IUCr

Thanks for the visit Nobel laureate John Jumper & colleagues Kathryn Tunyasuvunakool and Lindsay Willmore from Google DeepMind. Always interesting to hear and discuss #AlphaFold and protein structure predictions.

Check it out for yourself: 🔗 alphafold.ebi.ac.uk

This artwork, inspired by a Chinese cobra 🐍 venom protein, uses red and green to depict danger and healing. Cardiotoxins ☠️ in #snake venom target the heart ❤️. Article on the science-behind-the-art ⬇️ www.ebi.ac.uk/pdbe/article... #SciArt #PDBart #Poison #NatureArt

📢 New online on-demand course: 👉 www.ebi.ac.uk/training/onl... Not all 3D macromolecular models are created equal! Companion to our #AlphaFold course, this free tutorial upskills for evaluation of BOTH experimental & predicted models! #Biology #Chemistry #Science

Highlights from #ISMBECCB2025: 📺 www.youtube.com/watch?v=_4NO...

We were thrilled to represent PDBe (PDBe.org) at #ISMBECCB2025. A great opportunity to connect with users, collaborators & fellow data enthusiasts alongside our @ebi.embl.org colleagues! Thanks to everyone who chatted with us about proteins, RNA, DNA, ligands & more! #Science #Chemistry #Biology

Did you attend @iscb.bsky.social's #ismbeccb2025 🇬🇧? @ebi.embl.org colleagues (including reps from #Ensembl, @deciphergenomics.bsky.social, @training.ebi.embl.org, @pdbeurope.bsky.social and @expressionatlas.bsky.social) surely did! 🧬 We snapped some pics of @malloryfreeberg.bsky.social in action 🎤

Structural bioinformaticians have been exchanging ideas in Liverpool at #ISMBECCB2025. 🗣️ Wondering what they talked about? ...RNA... 🔗 evryrna.ibisc.univ-evry.fr/evryrna/ 📖 RNA-TorsionBERT: europepmc.org/article/MED/... 💻 github.com/EvryRNA/RNA-... Thanks @3dsig.bsky.social for sharing!

🚀 Macromolecule structures have been front & center at #ISMBECCB2025 in Liverpool -- the world’s largest #bioinformatics meeting! 🗝️ Keynotes: www.iscb.org/ismbeccb2025... 🧬More strucurtal bionformatics / computational biology talks, #3DSIG stream: www.iscb.org/ismbeccb2025... @3dsig.bsky.social

PDBe team's posters viewable today at #ISMBECCB2025: 🧪 106 - Shape retrieval methods for the classification of protein surfaces! Poster abstracts (search by title or name) available here: www.iscb.org/ismbeccb2025...

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMBECCB2025. 🗣️ Wondering what they are talking about? ...chromatin modeling... 📖 pubmed.ncbi.nlm.nih.gov/40236036/ 💻 github.com/SFGLab/Repli... Thanks @3dsig.bsky.social for sharing!

PDBe is at #ISMBECCB2025! Structural Bioinformaticians & Computational Biologist sharing insight & inc. research on: ...GWAS (Genome-Wide Association Studies) + AlphaFoldDB & PDB + plants... 📖 doi.org/10.1016/j.cs... Abstracts: 🔗 www.iscb.org/ismbeccb2025... @iscb.bsky.social @3dsig.bsky.social

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMBECCB2025. 🗣️ Wondering what they are talking about? ...protein-protein interactions... bioinformatics.lt/ppi3d/clusters 📖 pubmed.ncbi.nlm.nih.gov/38619046/ Thanks @3dsig.bsky.social for sharing!

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMBECCB2025. 🗣️ Wondering what they are talking about? ...fast protein structure search (e.g. Foldseek) improvements... Talk abstracts: 🔗 www.iscb.org/ismbeccb2025... Thanks @3dsig.bsky.social for sharing!

PDBe team's posters viewable today at #ISMBECCB2025: 🧪 027 - Small molecules in the PDB 🧪 045 - AlphaFold Protein Structure Database 🧪 046 - Fragment-based screening data in the PDB 🧪 247 - Improved PDBe & PDBe-KB webpages Full titles in images. Abstracts: 🔗 www.iscb.org/ismbeccb2025...

PDBe is at #ISMBECCB2025! Structural Bioinformaticians & Computational Biologist sharing insight & inc. research on: ...protein complexes... 📖 AlphaPulldown2: pubmed.ncbi.nlm.nih.gov/40088942/ 💻 github.com/KosinskiLab/... Thanks @3dsig.bsky.social #3DSIG for sharing!

PDBe is at #ISMBECCB2025! Structural Bioinformaticians & Computational Biologist sharing insight & inc. research on: ...structure-based drug design... 📖 DrugHive: pubmed.ncbi.nlm.nih.gov/38187658/ 💻 github.com/jssweller/Dr... Thanks @3dsig.bsky.social #3DSIG for sharing!

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMBECCB2025 (@iscb.bsky.social). 🗣️ Wondering what they are talking about? Conference Abstracts: 🔗 www.iscb.org/ismbeccb2025... Thanks @3dsig.bsky.social for sharing!

PDBe is at #ISMBECCB2025! Structural Bioinformaticians & Computational Biologist sharing insight & inc. research on: ...predicting protein thermostability change upon mutation... 📖 OrgNet: pubmed.ncbi.nlm.nih.gov/40662839/ Conference Abstracts: 🔗 www.iscb.org/ismbeccb2025... @iscb.bsky.social

Did you know? The Citations tab shows: 📄 Papers and Reviews citing the structure publication 🔎 Papers and Reviews mentioning the PDB ID 🧬 Figures from open access publications via our integration with @europepmc.org‬ #PDBeBeta #Bioinformatics #Bioinformatics #Biochemistry

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMB_ECCB2025. Wondering what they are talking about? Presenting on:

Structural bioinformaticians are exchanging ideas in Liverpool at #ISMBECCB2025. 🗣️ Wondering what they are talking about? Thanks @3dsig.bsky.social for sharing!

🧬 The PDBe team is excited to present at #ISMB_ECCB2025 in Liverpool this week! 📍 Join us July 20–24 at the world’s largest #bioinformatics gathering. Let’s talk #ProteinAnalysis, #StructuralBiology, #ComputationalBiology and more! 🔗 www.iscb.org/ismbeccb2025...

Like what you see? Download high res snapshots - 🚫© no copyright! 🔍 Try the beta now: wwwdev.ebi.ac.uk/pdbe/entry/p... #PDBeBeta #Bioinformatics #Biochemistry #Science #Molstar #OpenAccess #FAIR

🚨 Transitioning to PDBx/mmCIF & Extended PDB IDs Since every four-character PDB ID is expected to be assigned before 2028, the wwPDB encourages all users to adopt the extended PDB ID format & transition to PDBx/mmCIF format as soon as possible. ⬇️ Read more ⬇️ www.wwpdb.org/news/news?ye...

💬 Here's what users are saying about the #PDBeBeta! 🗣️ Thanks Robbie, Pawan and Yun Song for your feedback! 👂 We're listening - keep the feedback coming: tinyurl.com/pdbe-beta-form #Bioinformatics #Biochemistry #Biology #Chemistry #Science

🚨 Unifying PDBe API endpoints- Breaking changes to PDBe API 🚨 PDBe brings new updated REST API endpoints that fully replicates the functionality of the old service, while introducing performance enhancements and additional endpoints. ⬇️ Read more⬇️ www.ebi.ac.uk/pdbe/news/un...

Our featured structure article for July is now online!!! Venom that kills, could also heal? Snake venom has a molecule for that. Explore the science behind the snake bite. ⬇️ Read more⬇️ www.ebi.ac.uk/pdbe/article...

Join our data curation team! We are looking for a talented structural biologist or bioinformatician to join the data curation team at PDBe. Location: Hinxton, Cambridgeshire, UK Last date to apply: 03/08/2025 Apply here: embl.wd103.myworkdayjobs.com/en-US/EMBL/j...

wwPDB News Update! To accommodate the near-exponential growth of the EMDB, new EMDB IDs will now support up to six digits, such as EMD-123456. Previously, IDs were limited to five digits (e.g., EMD-0123, EMD-45678), capped at EMD-99999. ⬇️ Read more ⬇️ www.wwpdb.org/news/news#68...

💡 Structure data is only as useful as your confidence in it. That’s why the new PDBe entry pages feature an improved Model Quality tab for X-ray entries. 🔗 Check it out: wwwdev.ebi.ac.uk/pdbe/entry/p... Cryo-EM and NMR coming soon! #PDBeBeta #Biochemistry #Science #Crystallography

🧪 We're beta testing - and we want your thoughts! Try the redesigned PDBe entry pages & let us know: 🔸 What’s working? 🔸 What’s confusing? 🔸 What features do you miss? 💬 Feedback form: tinyurl.com/pdbe-beta-form #PDBeBeta #Bioinformatics #Biochemistry #Science #UserVoice

What’s new in the redesigned PDBe entry pages? 🧪 Cleaner layout 🧪 Interactive 3D viewers 🧪 Contextual annotations 🧪 Easier navigation See for yourself: wwwdev.ebi.ac.uk/pdbe/entry/p... #PDBeBeta #Bioinformatics #Biochemistry #Science

🚀 PDBe Entry Pages have a new look! We've redesigned them to be more user-friendly, better integrated, and more informative. 🔍 Try the beta now: wwwdev.ebi.ac.uk/pdbe/entry/p... 🗣️ Tell us what you think! Also on Mobile! #PDBeBeta #Bioinformatics #Biochemistry #Science

Addictive grip & health impact of nicotine is reflected in this sculpture from a Warrandyte High School student. Nicotine, found in tobacco, binds to nicotinic acetylcholine receptors in the brain. More ⬇️ ebi.ac.uk/pdbe/article... #SciArt #PDBart #Tobacco