Hannes Becher
@h-a-n.bsky.social
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📥 46
📝 11
Data-driven breeding to feed the world sustainably
reposted by
Hannes Becher
Tanja Slotte
30 days ago
*Postdoc in Evolutionary genomics at Stockholm University* We are recruiting a postdoc for a large interdisciplinary project to investigate evolutionary drivers and genomic consequences of pollen evolution in response to pollination mode shifts in flowering plants. 1/5
su.varbi.com/what:job/job...
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reposted by
Hannes Becher
Chenxin Li, PhD
28 days ago
Please share! I'm looking for a postdoc. The position is to lead one of the following projects: 1) regulation of plant specialized metabolism by cell fate, or 2) foliar embryogenesis in the succulent plant Kalanchoe. Learn more abt projects:
cxli233.github.io/cxLi_lab/res...
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Plant cells are totipotent, meaning individual cells have the potential to develop into a full organism, a property unique to the zygote for animals. However, in most species for most cells, plant cells are not spontaneously totipotent, since they must be treated with specific hormone combinations to unlock their totipotency. Species within the Kalanchoe genus is unique as they spontaneously develop foliar embryos that are fully realized plantlets with shoot and root from notches along the edges of leaves. We speculate that the progenitor cells that give rise to these foliar embryos are totipotent, and we are using single cell techniques to identify & characterize them. In addition to being a fundamental process for plant biology, we foresee unlocking totipotency has many biotechnological applications, such as faciliating genetic transformation and the development of synthetic organs of biomanufacturing.
https://cxli233.github.io/cxLi_lab/research
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PCA for visualising large
#pedigrees
? Check out this brief and accessible blog post
wp.me/pbTxyW-1ve
@roslininstitute.bsky.social
@highlanderlab.bsky.social
Thanks to co-authors
@epigenci.bsky.social
@gregorgorjanc.bsky.social
and Ros Craddock!
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Visualising large pedigrees with PCA
Here is a brief post about our recent paper on using PCA to visualise large pedigrees. This is the result of a collaboration between Hanbin Lee (University of Michigan) and colleagues at the Roslin…
https://wp.me/pbTxyW-1ve
25 days ago
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Pleased the announce new
#science
from the
@highlanderlab.bsky.social
at the
@roslininstitute.bsky.social
Turn your multi-million individual
#pedigree
into a
#PCA
plot in not time with our R package randPedPCA, available on CRAN!
about 1 month ago
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Thank you, Prof Jelena Ramljak and Assoc Prof Valentino Drzaić from the University of Zagreb for two excellent
#sheep
#conservation
#genomics
talks at our
@cgdg.bsky.social
seminar! Great to hear news about the
#OPTISheep
project. Thanks,
@roslininstitute.bsky.social
, for the travel funding!
4 months ago
0
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Two days left to apply for these postdoc positions in breeding genomics and statistics at
@roslininstitute.bsky.social
@uoe-sps.bsky.social
add a skeleton here at some point
4 months ago
0
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Two 3y postdocs available at Edinburgh's Roslin Institute in breeding *simulation software development* and *biometrics/applied statistics*. Check out
elxw.fa.em3.oraclecloud.com/hcmUI/Candid...
and
elxw.fa.em3.oraclecloud.com/hcmUI/Candid...
@gregorgorjanc.bsky.social
@roslininstitute.bsky.social
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Postdoctoral Fellow in Population and Quantitative Genomics
We are looking to fill a post for postdoctoral fellow in population and quantitative genomics within the BBSRC-funded HiPerBreedSim project. In this role, you will leverage recent advances in working ...
https://elxw.fa.em3.oraclecloud.com/hcmUI/CandidateExperience/en/sites/CX_1001/jobs/preview/12513
4 months ago
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New results out in
#Genetics
on predicting the effect of Hill-Robertson interference caused by purifying selection in non-recombining genome regions. Check out
doi.org/10.1093/gene...
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A model of Hill-Robertson interference caused by purifying selection in a non-recombining genome
Abstract. A new approach to modeling the effects of Hill-Robertson interference on levels of adaptation and patterns of variability in a non-recombining ge
https://doi.org/10.1093/genetics/iyaf048
6 months ago
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Check our preprint
doi.org/10.1101/2025...
and associated R package for turning large
#pedigrees
into
#PCA
plots
add a skeleton here at some point
6 months ago
0
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reposted by
Hannes Becher
Gregor Gorjanc
8 months ago
New pre-print: “Leveraging ancestral recombination graphs for quantitative genetic analysis of rice yield in indica and japonica subspecies” by Ines Rebollo, Jana Obsteter, Daniel Tolhurst, Juan Rosas, and me
www.biorxiv.org/content/10.1...
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Leveraging ancestral recombination graphs for quantitative genetic analysis of rice yield in indica and japonica subspecies
Rice (Oryza sativa L.) has two main subspecies, indica and japonica , which coexist in many regions but are often treated separately during breeding. Combining both subspecies in quantitative genetic ...
https://www.biorxiv.org/content/10.1101/2025.01.14.633033v1
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The efficacy of natural selection differs between lifestages in haploid-diploid Marchantia.
#bryophyte
#population
#genomics
Preprint out
doi.org/10.1101/2024...
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Selection efficacy differs between lifestages in the haploid-diploid Marchantia polymorpha subsp. ruderalis
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
https://doi.org/10.1101/2024.09.06.611587
about 1 year ago
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Is anybody seeing more Marchantia than usual this year?
#bryophyte
#plantblindness
bryoevolgen.com/2024/09/07/a...
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A Marchantia year – Urban liverworts in Edinburgh
2024 has been a great year for the common liverwort (Marchantia polymorpha) in Edinburgh. It is almost everywhere you look. I started collecting M. polymorpha in 2021. During the subsequent years, I r...
https://bryoevolgen.com/2024/09/07/a-marchantia-year-urban-liverworts-in-edinburgh/
about 1 year ago
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