Ji Zhang
@ecoloji.bsky.social
📤 68
📥 106
📝 44
PhD | ecologist | 🌿 | 🍄 |
reposted by
Ji Zhang
Methods in Ecology and Evolution
about 23 hours ago
New special feature!🌍🧪 Here, our guest editors research at the cutting edge of the AI–ecology interface, focusing on work that advances the state of both fields beyond proof-of-concept to true interdisciplinary insight. Read the full collection👇️
buff.ly/GbMxxmW
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reposted by
Ji Zhang
Larry M. York
about 7 hours ago
One year ago I led an effort to standardize microbial imaging at work, procuring a colony doc it imager. We've demonstrated high reliability measures of microbial responses to minerals and to other species. Now, I've created an open-source robotic workcell to do the same. More soon!
add a skeleton here at some point
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reposted by
Ji Zhang
Joint Genome Institute
about 10 hours ago
This study looks at microbiomes in aerial surfaces of plants and their roles in environmental processes, in order to advance microbiome utility across the bioeconomy.
@ucmerced.bsky.social
🖥️🧬 🦠 🌱
https://jgi.doe.gov/user-science/science-stories/secrets-needles-what-microbes-do-conifer-leaves
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Secrets of the Needles: What Microbes do on Conifer Leaves | Joint Genome Institute
Novel study looks at microbiomes in aerial surfaces of plants, and their roles in plant health and environmental processes
https://jgi.doe.gov/user-science/science-stories/secrets-needles-what-microbes-do-conifer-leaves
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reposted by
Ji Zhang
New Phytologist
2 days ago
#TansleyInsight
: Endophytes with
#mycorrhizal
potentials: biological and ecological implications Yuan et al. 👇 📖
nph.onlinelibrary.wiley.com/doi/10.1111/...
#LatestIssue
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reposted by
Ji Zhang
Shingo Miyauchi
6 days ago
Our preprint on Agaricales comparative genomics is out! 🍄 122 genomes reveal how grassland fungi evolved diverse strategies: Ectomycorrhizal species lost plant-degrading enzymes while saprotrophs expanded them. 👉https://shorturl.at/shWPp
@fmartin54.bsky.social
#Fungi
#Genomics
#SoilEcology
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Climate variability shapes the mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and a mycophagous mammal
nsojournals.onlinelibrary.wiley.com/doi/10.1002/...
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Climate variability shapes the mutualistic interaction between truffle‐like ectomycorrhizal (ECM) fungi and a mycophagous mammal
The mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and mycophagous mammals is fundamental to forest health, supporting fungal dispersal, soil structure, nutrient cycling, an...
https://nsojournals.onlinelibrary.wiley.com/doi/10.1002/ecog.08410
6 days ago
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besjournals.onlinelibrary.wiley.com/share/AU82VP...
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Dual‐scale drivers of soil biodiversity in agroecosystems: Field management outweighs landscape effects, but both matter
You have to enable JavaScript in your browser's settings in order to use the eReader.
https://besjournals.onlinelibrary.wiley.com/share/AU82VP7T8XVCCXGKYWVJ?target=10.1111/1365-2664.70295
8 days ago
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reposted by
Ji Zhang
Trends in Plant Science
8 days ago
Beneficial microbes in agriculture: curse or blessing?
#plantscience
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Beneficial microbes in agriculture: curse or blessing?
In modern agriculture, microbial inoculants isolated and collected from all over the world have gained popularity as a means of reducing the amount of fertilizer by increasing the availability of nutrients and mitigating environmental stress that is often connected with climate change. Concerning biocontrol, microbial inoculants are known to be effective in integrated pest management. However, the introduction of alien microbes can lead to the emergence of antagonists of the natural soil microbiota, which might drastically change the latter and ultimately have a negative impact on the whole natural soil ecosystem, causing unforeseeable consequences. We will discuss various aspects of the employment of microbial inoculants in agriculture, with a focus on the largely neglected threat posed by potentially invasive microbes.
http://dlvr.it/TQjKpy
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reposted by
Ji Zhang
Alberto Orgiazzi
13 days ago
Our new paper is out in
@nature.com
"Pesticide residues alter taxonomic and functional biodiversity in soils" Largest in field assessmnt of pesticide effects on soil life🧬🇪🇺🦠🍄
www.nature.com/articles/s41...
@scienceinnovation.ec.europa.eu
@panospanagos.bsky.social
@mvanderheijden.bsky.social
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reposted by
Ji Zhang
Francis M. Martin
14 days ago
I'm delighted to inform you that our paper "Ecological genomics of saprotrophy to biotrophy transitions in the genus Clitopilus" was published in IMA Fungus. A long standing collaboration with Zhilin Yuan at RISF, Chinese Academy of Forestry, Hangzhou:
imafungus.pensoft.net/articles.php...
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Ecological genomics of saprotrophy to biotrophy transitions in the genus Clitopilus (Fr. ex Rabenh.) P. Kumm. (Agaricales, Entolomataceae)
Transitions between saprotrophic and biotrophic lifestyles represent pivotal evolutionary events in fungal ecology; however, the genomic and physiological mechanisms underlying such shifts remain poor...
https://imafungus.pensoft.net/articles.php?id=179417
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reposted by
Ji Zhang
Journal of Applied Ecology
21 days ago
Did you know that we're looking for new Associate Editors to join our Editorial Board? 🌍💭 If you'd like to help shape the publishing landscape of the BES journals, find out more below! 👇
britishecologicalsociety.org/content/appl...
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reposted by
Ji Zhang
British Ecological Society
14 days ago
The Agricultural Ecology Special Interest Group are excited to invite you to their new monthly online Agro-Ecology Connect coffee mornings, which aim to spark ideas, connections and curiosity within the agro-ecology field. The first session will run on 31 January, aimed at early-career researchers.
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Unique species interactions determine the decomposition activity of fungal communities - Kaschper - Functional Ecology - Wiley Online Library
besjournals.onlinelibrary.wiley.com/doi/10.1111/...
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Unique species interactions determine the decomposition activity of fungal communities
Read the free Plain Language Summary for this article on the Journal blog.
https://besjournals.onlinelibrary.wiley.com/doi/10.1111/1365-2435.70254
21 days ago
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"By considering the relationships between soil biodiversity and ecosystem functioning we can connect small-scale interactions among plants, microorganisms and animals to ecosystem services and planetary sustainability." Soil biodiversity effects on ecosystems
www.nature.com/articles/s44...
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Client Challenge
https://www.nature.com/articles/s44358-025-00123-z
28 days ago
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reposted by
Ji Zhang
Mike Kaspari
about 1 month ago
A rare gift in science is the ability to conjur a question so that its potential answer is brought into focus. As it is in art. “There’s this Chekhov quote that I’m kind of living by lately. He says a work of art doesn’t have to solve a problem — it just has to formulate it correctly” -G Saunders
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reposted by
Ji Zhang
ICOM2026
about 1 month ago
🚨#ICOM2026 Registration is now OPEN🚨
icom2026.org/register/%F0...
💰Early bird rates are available until April 12 🍽️ Conference dinner is included with registration Join IMS for reduced registration fee 👉
mycorrhizas.org/become-a-mem...
#ICOM2026
#mycorrhiza
#IMS
@mycorrhizaims.bsky.social
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Happy Holidays!
about 2 months ago
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reposted by
Ji Zhang
New Phytologist
about 2 months ago
Global Russula sequence analysis refines biogeographic patterns and host associations Noffsinger et al.
@chance-est.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...
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reposted by
Ji Zhang
Mireia Gómez-Gallego
about 2 months ago
The latent presence of Cryptostroma corticale (causal agent of the sooty bark disease) is widespread among French sycamore maple populations. Host density and water deficit seem to drive the silent spread of the pathogen. See our paper:
doi.org/10.1111/ppa....
@umr-iam.bsky.social
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Widespread Latent Presence of Cryptostroma corticale in Sycamore Maple in France
Increasing drought events promote forest disease emergence, exemplified by Sooty Bark Disease (SBD) of Acer pseudoplatanus caused by Cryptostroma corticale. Across six French regions, the pathogen wa....
https://doi.org/10.1111/ppa.70104
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reposted by
Ji Zhang
Stephanie Watts-Fawkes
2 months ago
Abstracts are open for
#ICOM2026
! I can’t wait to spend a week immersing myself in all things
#mycorrhiza
in beautiful Cairns 🌴 There are so many symposia to choose from - go and have a look!
icom2026.org/symposia/
add a skeleton here at some point
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reposted by
Ji Zhang
Angélica L. González
2 months ago
Thrilled to share our new
#stoichiometry
paper on the environmental correlates of plant and animal stoichiometry. This was a fantastic collaborative work supported by
#idiv
www.nature.com/articles/s41...
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Nitrogen deposition reveals global patterns in plant and animal stoichiometry - Nature Communications
Organisms vary in their nitrogen and phosphorus content, shaping ecological and evolutionary processes. This study shows that nitrogen deposition is a consistent global factor associated with plant an...
https://www.nature.com/articles/s41467-025-65960-0
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rdcu.be/eTVUA
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Nitrogen deposition reveals global patterns in plant and animal stoichiometry
Nature Communications - Organisms vary in their nitrogen and phosphorus content, shaping ecological and evolutionary processes. This study shows that nitrogen deposition is a consistent global...
https://rdcu.be/eTVUA
2 months ago
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reposted by
Ji Zhang
UMR IAM
2 months ago
Big congratulations to our five
@umr-iam.bsky.social
scientists featuring in the 2025 Global Ranking of the World’s Top 2% Scientists 🏆 prepared by Stanford University: Aurélie Deveau,
@fmartin54.bsky.social
, Pascale Frey-Klett, Annegret Kohler and Nicolas Rouhier. 👏👏👏 🍾🥂🎉
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The Great Wall of China harbors a diverse and protective biocrust microbiome: Current Biology
www.cell.com/current-biol...
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The Great Wall of China harbors a diverse and protective biocrust microbiome
Cao et al. find that the biocrusts on the Great Wall establish a unique microhabitat, enhancing microbial abundance, diversity, and stress resistance while reducing metabolic pathways linked to biodet...
https://www.cell.com/current-biology/fulltext/S0960-9822%2825%2901468-X
2 months ago
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reposted by
Ji Zhang
International Mycorrhiza Society
2 months ago
Meet
@icom2026.bsky.social
Plenary speakers! Dr Claire Veneault-Fourrey - from INRAE (Nancy, France) - will be opening the session "Genomic pathways and regulatory networks: molecular foundations of mycorrhizal adaptation and host interactions"
#ICOM2026
icom2026.org/speakers/
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Analong chuanjieensis
3 months ago
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Increasing Prevalence of Plant-Fungal Symbiosis Across Two Centuries of Environmental Change
onlinelibrary.wiley.com/doi/10.1111/...
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Increasing Prevalence of Plant‐Fungal Symbiosis Across Two Centuries of Environmental Change
This research examines seeds sampled from historic herbarium specimens to look for changes in the presence of beneficial fungal symbionts in response to climate change drivers. These specimens from t...
https://onlinelibrary.wiley.com/doi/10.1111/gcb.70577?af=R
3 months ago
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Medicinal plants meet modern biodiversity science: Current Biology
www.cell.com/current-biol...
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Medicinal plants meet modern biodiversity science
Davis and Choisy review how scientific understanding of medicinal plants will be revolutionized by integrating and synthesizing concepts and methods from the diverse fields of Evolutionary Ecology, Mo...
https://www.cell.com/current-biology/fulltext/S0960-9822%2823%2901738-4
3 months ago
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The human fingerprint of medicinal plant species diversity
www.sciencedirect.com/science/arti...
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The human fingerprint of medicinal plant species diversity
Medicinal plants have been integral to human cultures for millennia and have played a central role in the development and expansion of societies.1 The…
https://www.sciencedirect.com/science/article/pii/S0960982225012503
3 months ago
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reposted by
Ji Zhang
Francis M. Martin
4 months ago
Join us! Online seminar in the Challenges in Forest Ecology series on Nov. 5th at 4:00 pm
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It’s nice to meet Prof. Laurent Philippot and Dr. Chunkai Li at the Joint Conference of the 1st ISME Asia Forum and 2025 CAME.
4 months ago
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Floral scent chemodiversity is associated with high floral visitor but low bacterial richness on flowers - Hanusch - New Phytologist - Wiley Online Library
nph.onlinelibrary.wiley.com/doi/10.1111/...
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Floral scent chemodiversity is associated with high floral visitor but low bacterial richness on flowers
Floral scents are complex blends of volatile compounds, yet the influence of floral scent chemodiversity, the richness, evenness, and functional disparity of phytochemical compounds in shaping inter.....
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70600?af=R
4 months ago
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Beyond phylogeny: phytochemical diversity as a unique metric for biodiversity in the Gentianales - Richard‐Bollans - New Phytologist - Wiley Online Library
nph.onlinelibrary.wiley.com/doi/10.1111/...
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https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70653?af=R
4 months ago
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reposted by
Ji Zhang
Frédérique Reverchon
4 months ago
Finally out! 🥳 📖 Soil microorganisms for plant growth promotion and soil health Check our chapter on
#multiomics
for sustainable agriculture! 🧬👩💻
www.sciencedirect.com/book/9780443...
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Soil Microorganisms for Plant Growth Promotion and Soil Health
Soil Microorganisms for Plant Growth Promotion and Soil Health provides readers with an overview of plant growth-promoting microorganisms and their...
https://www.sciencedirect.com/book/9780443340550/soil-microorganisms-for-plant-growth-promotion-and-soil-health
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reposted by
Ji Zhang
Frédérique Reverchon
4 months ago
Weekend read 🤓 "How to harness the effects of exudates and microbes that support beneficial plant–plant interactions for sustainable agriculture"
add a skeleton here at some point
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reposted by
Ji Zhang
ICOM2026
4 months ago
🚨Symposia application deadline EXTENDED!🚨 The
#ICOM2026
organizing committee are now accepting applications for symposia until Friday, the 31st of October. Form and details here ⬇️
icom2026.org/symposia/
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ICOM2026 – Call for Symposia
Call for Symposia The Call for Symposia at ICOM2026 is open! Download Application Form below Deadline for submission: 15 October 2025 Decision: 1 November 2025 ICOM2026 will host a series of sympos…
https://icom2026.org/symposia/
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reposted by
Ji Zhang
Martin A. Nuñez
4 months ago
New paper!!
onlinelibrary.wiley.com/doi/10.1111/...
Global Homogenisation of Plant Communities Along Mountain Roads by Non‐Native Species
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Global Homogenisation of Plant Communities Along Mountain Roads by Non‐Native Species Despite Mixed Effects at Smaller Scales
Aim Mountain ecosystems are experiencing increased invasion of non-native plants. These increases in non-native species put mountains at risk of biotic homogenisation and a reduction of biodiversity...
https://onlinelibrary.wiley.com/doi/10.1111/geb.70137
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Unraveling complexity in climate change effects on beneficial plant–microbe interactions: mechanisms, resilience, and future directions - Afkhami - New Phytologist - Wiley Online Library
nph.onlinelibrary.wiley.com/doi/10.1111/...
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Unraveling complexity in climate change effects on beneficial plant–microbe interactions: mechanisms, resilience, and future directions
Plant microbiomes have the potential to mitigate the impacts of climate change, yet both the complexity of climate change and the complexity of plant–microbe interactions make applications and future...
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70644
4 months ago
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reposted by
Ji Zhang
Shingo Miyauchi
4 months ago
🌟Call for Papers: Genomics of Symbiosis🌟 I am a guest editor for BMC Genomics. Looking forward to your exciting manuscripts on all types of symbiosis on earth including symbiotic fungi and their hosts! 🌿🍄
biomedcentral.com/collections/...
#BMCgenomics
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Microbiome spatial scaling varies among members, hosts, and environments across model island ecosystems url:
academic.oup.com/ismej/articl...
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Microbiome spatial scaling varies among members, hosts, and environments across model island ecosystems
Abstract. The species area relationship is a classic ecological law describing the relationship between habitat increase and the number of species. Species
https://academic.oup.com/ismej/article/doi/10.1093/ismejo/wraf228/8284954
4 months ago
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reposted by
Ji Zhang
Martin A. Nuñez
4 months ago
For the record: science has no official language.
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From beginning to end: the synecology of tree‐killing bark beetles, fungi, and trees - Six - Biological Reviews - Wiley Online Library
onlinelibrary.wiley.com/doi/10.1111/...
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From beginning to end: the synecology of tree‐killing bark beetles, fungi, and trees
Over a century of research has revealed an amazing complexity of behaviours and physiological adaptations that allow tiny bark beetles to overcome large trees, sometimes resulting in outbreaks that k...
https://onlinelibrary.wiley.com/doi/10.1111/brv.70084#
4 months ago
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reposted by
Ji Zhang
Gaurav Pandharikar
4 months ago
www.sciencedirect.com/science/arti...
🌿 Excited to share our Primer on fungal endophytes, the elusive members of the fungal kingdom that defy easy classification. Neither pathogens nor symbionts in the strict sense, they challenge how we define ecological guilds.
@umr-iam.bsky.social
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Fungal endophytes
Organisms are commonly grouped into ecological guilds that reflect their shared resource use and similar ecological roles. The guild concept has been …
https://www.sciencedirect.com/science/article/pii/S0960982225011248?dgcid=author
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Jiuzhai Valley in Sichuan is amazing.
4 months ago
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Recent vegetation shifts in the French Alps with winners outnumbering losers - Goury - Journal of Ecology - Wiley Online Library
besjournals.onlinelibrary.wiley.com/doi/10.1111/...
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Recent vegetation shifts in the French Alps with winners outnumbering losers
Analysing 11 million records of 4250 French Alps plant species over 30 years shows that one-third expanded their range, dominated by thermophilic and fast-colonizing species, while 13% declined. Most...
https://besjournals.onlinelibrary.wiley.com/doi/10.1111/1365-2745.70159?af=R
5 months ago
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Gene Family Expansions Provide Molecular Flexibility Required for Context‐Dependent Species Interactions - Hernandez - 2025 - Ecology Letters - Wiley Online Library
onlinelibrary.wiley.com/doi/10.1111/...
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Gene Family Expansions Provide Molecular Flexibility Required for Context‐Dependent Species Interactions
We explore how the evolution of molecular complexity through gene family expansions is essential for regulating arbuscular mycorrhizal symbiosis in different environmental contexts. Specifically, we ....
https://onlinelibrary.wiley.com/doi/10.1111/ele.70213
5 months ago
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The path toward a unified trait space: synthesizing plant functional diversity - Carmona - New Phytologist - Wiley Online Library
nph.onlinelibrary.wiley.com/doi/10.1111/...
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The path toward a unified trait space: synthesizing plant functional diversity
Plant traits capture the remarkable diversity of ecological strategies, yet synthesizing this complexity into coherent frameworks remains challenging. Trait spaces have significantly advanced this ef...
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70584
5 months ago
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A simple plant–mycorrhizal fungal resource trade co‐evolution model explains mutualism stability, extinction and transitory parasitism via fitness feedback - Grasso - New Phytologist - Wiley Online Library
nph.onlinelibrary.wiley.com/doi/10.1111/...
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A simple plant–mycorrhizal fungal resource trade co‐evolution model explains mutualism stability, extinction and transitory parasitism via fitness feedback
The mutualism between mycorrhizal fungi and plants has persisted for over 400 million years, despite the mutualism paradox predicting that mutualisms should be evolutionarily unstable due to the fit...
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70540?af=R
5 months ago
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The cycad coralloid root: is there evidence for plant-microbe coevolution?
www.sciencedirect.com/science/arti...
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The cycad coralloid root: is there evidence for plant-microbe coevolution?
Cycads are survivors, ancient plants originating in the Carboniferous. We hypothesize that cycad resilience and recent diversification could be partia…
https://www.sciencedirect.com/science/article/pii/S1369527425000827
5 months ago
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