International Society for Plant Low Oxygen Research
@isplore.bsky.social
📤 747
📥 258
📝 133
International Research Community interested in Plant Responses to Hypoxia & Flooding www.isplore.org
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Join and follow our starter pack.
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add a skeleton here at some point
over 1 year ago
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nph.onlinelibrary.wiley.com/doi/10.1111/...
#plantscience
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Chloroplast differentiation in epidermal cells: an environmental response supporting submerged photosynthesis in Rorippa aquatica
While the epidermal cells of terrestrial plants typically lack chloroplasts, this is not the case for aquatic plants, a trait that likely evolved to enhance photosynthetic efficiency underwater. Amp...
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70938?utm_medium=article&utm_source=researchgate.net
6 days ago
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reposted by
International Society for Plant Low Oxygen Research
International Society for Protein Termini (ISPT)
24 days ago
Protein degradation in Turnip - an adapted Arg/N-degron pathway. Preprint from Brian Mooney et al. Emmanuelle Graciet lab.
www.biorxiv.org/content/10.6...
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Functional divergence of the Arg/N-degron pathway between the crop Brassica rapa and the model plant Arabidopsis thaliana
The ubiquitin-dependent Arg/N-degron pathway relates the stability of a substrate protein to the nature of its N-terminal amino acid residue or its biochemical modifications, with some N-terminal residues being recognized by specific E3 ubiquitin ligases, resulting in the ubiquitylation and degradation of the substrate protein. Work in the model plant Arabidopsis thaliana has shown that the Arg/N-degron pathway is a key regulator of plant responses to hypoxia, which can be either physiological or a stress in the context of waterlogging or submergence. The role of the Arg/N-degron pathway in hypoxia response is mediated via the oxygen-dependent degradation of group VII ETHYLENE RESPONSE FACTOR (ERFVII) transcription factors, which act as the master regulators of the hypoxia response program in plants. Analysis of Arabidopsis mutants for different enzymatic components of the Arg/N-degron pathway has also revealed its roles in the regulation of responses to other abiotic stresses (e.g. salt stress), as well as to pathogens. Although much has been learned from studies in Arabidopsis about the functions of the Arg/N-degron pathway, very little is known about this pathway in crops, including in Brassica crops such as oilseed rape, cabbage or turnip. To determine functional similarities and divergence of the Arg/N-degron pathway between Arabidopsis and Brassica crops, we isolated and characterized the first Arg/N-degron pathway mutants in Brassica rapa (turnip, pak choi), a diploid Brassica crop closely related to oilseed rape. We focused on two enzymatic components, namely the arginine-transferases ( ATE s) and the E3 ubiquitin ligase PROTEOLYSIS6 ( PRT6 ). Our results show both similarities and divergence of function for these Arg/N-degron pathway components in B. rapa compared to Arabidopsis. Specifically, ATE mutants in B. rapa arrest their development at the seedling stage, which contrasts with the mild phenotypic defects of the equivalent Arabidopsis mutants. Double mutant lines for two of the three PRT6 genes in B. rapa indicated a constitutive activation of hypoxia response genes at the transcriptional level, as shown in the single prt6 mutant in Arabidopsis. However, contrary to Arabidopsis, the B. rapa double mutants were more sensitive to waterlogging and hypoxia, and did not show differential response to salt stress or to biotic stress compared to the wild type. The functional divergence identified likely reflects variability in each species in the substrate repertoire and/or in the regulation of pathways or targets downstream of Arg/N-degron pathway substrates. Such differences could be driven by direct selective pressures at N-termini (e.g. gain or loss of a destabilizing N-terminal residue), or by species-specific proteases that may generate destabilizing neo-N-termini after cleavage. These similarities and differences highlight the difficulties in translating research findings from Arabidopsis to crops, even within the same plant family (Brassicaceae) and highlight the need to study pathways in crops. ### Competing Interest Statement The authors have declared no competing interest. Science Foundation Ireland, https://ror.org/0271asj38, 13/IA/1870, 20/FFP-P/8433 Irish Research Council, https://ror.org/051xex213, GOIPG/2017/2
https://www.biorxiv.org/content/10.64898/2025.12.04.692320v2
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International Society for Plant Low Oxygen Research
Alex Costa
21 days ago
@ScienceAdvances
@science.org
Using MAPPI for real-time whole-plant imaging, we reveal the earliest flooding response — a Ca²⁺ signal, expected, yet now directly visualised and strongest in young leaves...🔬📷
science.org/doi/10.1126/...
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doi.org/10.1093/plph...
#plantscience
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1-Aminocyclopropane-1-carboxylic acid oxidase determines the fate of ethylene biosynthesis in a tissue-specific way
The production of the plant hormone ethylene is controlled by the biosynthesis enzye ACO in a tissue-specific way, which modulates plant development and st
https://doi.org/10.1093/plphys/kiag025
22 days ago
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nph.onlinelibrary.wiley.com/doi/10.1111/...
#plantscience
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MITOGEN‐ACTIVATED PROTEIN KINASE9 fine‐tunes hypoxia signaling by phosphorylating ERF‐VII transcription factors in Arabidopsis
In plants, hypoxia sensing is controlled by the stabilization of group VII ethylene response factors (ERF-VIIs), which are post-translationally activated by the mitogen-activated protein kinases (MA...
https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.70964
23 days ago
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International Society for Plant Low Oxygen Research
Carbon Brief
26 days ago
NEW – Climate change and La Niña made ‘devastating’ southern African floods more intense |
@ayeshatandon.carbonbrief.org
@yaninequiroz.bsky.social
Read here:
buff.ly/ksNRUK1
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reposted by
International Society for Plant Low Oxygen Research
Nature Communications
28 days ago
New study shows that
#marine
#HeatWaves
exacerbate extreme
#rainfall
over land by 20–30%, increasing
#flood
risks for
#coastal
regions.
www.nature.com/articles/s41...
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Extreme rainfall over land exacerbated by marine heatwaves - Nature Communications
This study shows that oceanic extreme warm events, termed marine heatwaves, exacerbate extreme rainfall over land by 20–30%, increasing flood risks for coastal regions.
https://www.nature.com/articles/s41467-026-68431-2
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International Society for Plant Low Oxygen Research
DOMPS
about 1 month ago
From root death to repatterning. Today we heard
@kevindaniel.bsky.social
(from
@hartman-plantlab.com
) talk about Arabidopsis root shape plasticity under waterlogging stress. Curious to hear more? You’ll have another chance next week at the ISRR Symposium. 📅 Jan 23 | 🕥 10:15
#PlantScience
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Plastid-to-nucleus communication under hypoxia involves group VII ethylene response factors in Arabidopsis thaliana
#plantscience
www.pnas.org/doi/abs/10.1...
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PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
https://www.pnas.org/doi/abs/10.1073/pnas.2525801123
about 1 month ago
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reposted by
International Society for Plant Low Oxygen Research
Journal of Experimental Botany
about 1 month ago
🌾⚠️ RESEARCH ARTICLE ⚠️🌾 Analyses of multiple mutants of anaerobic metabolism enzymes demonstrated that defects in ethanol fermentation reduce arsenic levels in rice and identified a new low-arsenic rice - Hayashi et al. 🔗
doi.org/10.1093/jxb/...
#PlantScience
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Happy New Year! 2026 starts with 2
#plantscience
single cell / nuclei papers describing hypoxia responses in Arabidopsis shoot and root tissues 🌱
bsky.app/profile/thep...
add a skeleton here at some point
about 2 months ago
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International Society for Plant Low Oxygen Research
Pierdomenico Perata
about 2 months ago
New in Science of Plants: "Inferring hypoxia-responsive regulators of cell fate in plant meristems throughsingle-cell transcriptomics"
rdcu.be/eXYvw
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International Society for Plant Low Oxygen Research
New Phytologist
about 2 months ago
Discrete and cell-specific hypoxic responses in Arabidopsis roots resolved by single-nuclei transcriptomics Hill et al.
nph.onlinelibrary.wiley.com/doi/10.1111/...
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www.cell.com/current-biol...
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The convergent genomic dynamism for aquatic adaptation in vascular plants
Chen et al. reveal accelerated evolutionary rates and substantial gene family co-expansions, not just losses, as convergent dynamism for aquatic plant adaptation and highlight divergent transcriptiona...
https://www.cell.com/current-biology/fulltext/S0960-9822%2825%2901528-3#
about 2 months ago
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www.sciencedirect.com/science/arti...
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Heat stress accelerates the development of hypoxia and hypoxia-induced ferroptosis-like cell death in barley root tip under waterlogging
The root tip is extremely sensitive to waterlogging, where the hypoxic conditions evoke an extensive cell death within a few hours. Using a pharmacolo…
https://www.sciencedirect.com/science/article/pii/S0098847225002230?via%3Dihub
about 2 months ago
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reposted by
International Society for Plant Low Oxygen Research
Muhammad Atiq Ashraf
2 months ago
Happy to share the new insights of our group.
@ateeqmuhammad.bsky.social
@isplore.bsky.social
#plantscience
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Molecular mechanisms and adaptive strategies for hypoxia tolerance in horticultural crops: beyond model systems - Horticulture Advances
Waterlogging-induced hypoxia threatens horticultural crop production by disrupting metabolic processes, nutrient uptake, and plant health. Despite significant progress in model plants, such as Arabido...
https://share.google/V6Frd6Xkv2oUqwOpj
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reposted by
International Society for Plant Low Oxygen Research
Sjon Hartman
2 months ago
Cool paper
#plantscience
www.nature.com/articles/s41...
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A cis-regulatory element of the PHYTOCHROME A gene confers the submergence escape capacity for amphibious plants - Nature Communications
How did amphibious plants evolve the convergent strategy to escape submergence by fast shoot elongation? Yang et al. reveal the pivotal role of a cis-regulatory element in the PHYA promoter in promoti...
https://www.nature.com/articles/s41467-025-66078-z
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Validate User
https://doi.org/10.1093/plphys/kiaf619
2 months ago
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reposted by
International Society for Plant Low Oxygen Research
Sjon Hartman
2 months ago
End of the year celebrations with lab 🎄🎊
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International Society for Plant Low Oxygen Research
bioRxiv Plant Bio
3 months ago
Functional divergence of the Arg/N-degron pathway between the crop Brassica rapa and the model plant Arabidopsis thaliana
https://www.biorxiv.org/content/10.64898/2025.12.04.692320v1
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International Society for Plant Low Oxygen Research
Journal of Experimental Botany
3 months ago
⬇️ SPECIAL ISSUE RESEARCH ⬇️ 🍅 Hypoxia in red tomato fruit enhances glycolysis, fermentation, GABA shunt, & accumulation of alanine & glycine, with columella tissue showing the highest metabolic activity & sensitivity to low oxygen stress- Li et al. 🔗
doi.org/10.1093/jxb/...
#PlantScience
🧪
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reposted by
International Society for Plant Low Oxygen Research
Fu-Chiun HSU
3 months ago
Our latest publication Physiological and transcriptomic dissection of submergence tolerance in cabbage highlights ERF-VII and N-degron regulation
doi.org/10.1016/j.en...
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Redirecting
https://doi.org/10.1016/j.envexpbot.2025.106288
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International Society for Plant Low Oxygen Research
Nature Geoscience
3 months ago
⚒️ Article: Extreme daily precipitation events over land could increase by 41% by 2100 with an increase in mesoscale moisture convergence
www.nature.com/articles/s41...
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Future extreme precipitation amplified by intensified mesoscale moisture convergence - Nature Geoscience
Extreme daily precipitation events over land could increase by about 41% by 2100 under a high-emissions scenario with an increase in mesoscale moisture convergence, according to an ensemble of climate...
https://www.nature.com/articles/s41561-025-01859-1?utm_source=bluesky&utm_medium=social&utm_campaign=ngeo
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TgRAV1–TgWRKY74–TgACS13 module fine‐tunes ethylene biosynthesis to modulate waterlogging‐induced root vitality in the gymnosperm Torreya grandis
Under waterlogging stress, the TgRAV1–TgWRKY74 regulatory module in Torreya grandis modulates expression of the ethylene biosynthesis gene TgACS13 through multiple mechanisms to control ethylene accu....
https://doi.org/10.1111/jipb.70100
3 months ago
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International Society for Plant Low Oxygen Research
N End Rules
3 months ago
Recent advances in the mechanism, transduction and function of oxygen sensing in plants
#nendrule
#hypoxia
#plantscience
academic.oup.com/jxb/advance-...
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Recent advances in the mechanism, transduction and function of oxygen sensing in plants
Abstract. Response to reduced ambient oxygen is a key component of plant adaptation in natural and farmed environments and is regulated by oxygen dependent
https://academic.oup.com/jxb/advance-article/doi/10.1093/jxb/eraf515/8340058
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International Society for Plant Low Oxygen Research
New Phytologist
3 months ago
Chickpea root stele maintains higher metabolism than cortex under all O₂ conditions de la Cruz Jiménez et al.
nph.onlinelibrary.wiley.com/share/YMVXXS...
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reposted by
International Society for Plant Low Oxygen Research
Yuri Telara
3 months ago
Happy to share the key part of my PhD! In our latest preprint with Salma Akter,
@emilyflashman.bsky.social
&
@beagiuntoli.bsky.social
, we show that H₂S is involved in oxygen sensing in plants! How? Check it out!🌱✨ Many thanks to all the authors involved!
www.biorxiv.org/content/10.1...
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Hydrogen sulfide modulates plant hypoxic responses through the persulfidation of Plant Cysteine Oxidases
Hydrogen sulfide (H₂S) is a gaseous molecule historically regarded as toxic. Nevertheless, increasing evidence has brought to light important physiological roles in both animals and plants. In plants,...
https://www.biorxiv.org/content/10.1101/2025.11.05.686772v1
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International Society for Plant Low Oxygen Research
N End Rules
4 months ago
Reconsider the potential suspension of Plant Biology Courses at UoN - Sign the Petition!
c.org/p5jy2GXHcX
via @UKChange
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Sign the Petition
Reconsider the potential suspension of Plant Biology Courses at UoN
https://c.org/p5jy2GXHcX
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www.sciencedirect.com/science/arti...
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HIGD2 Confers Hypoxic Stress Tolerance in Rice by Improving Mitochondrial Function
Flooding and oxygen deprivation severely impair mitochondrial energy metabolism in rice, reducing growth and survival under waterlogged conditions. To…
https://www.sciencedirect.com/science/article/pii/S0981942825012719?via%3Dihub
4 months ago
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reposted by
International Society for Plant Low Oxygen Research
Sjon Hartman
4 months ago
www.theguardian.com/environment/...
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Pakistani farmers to sue German polluters over climate-linked flood damage
Claimants seek compensation from RWE and Heidelberg Materials after extreme flooding destroyed harvests
https://www.theguardian.com/environment/2025/oct/28/pakistani-farmers-to-sue-german-polluters-over-climate-linked-flood-damage
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academic.oup.com/plphys/advan...
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Co-repressor AtSDR4L and its paralog regulate hormonal and hypoxia responses in multiple Arabidopsis seed compartments
Two homologous transcriptional co-repressors synergistically govern distinct and shared transcriptomic changes in seed compartments to facilitate seed germ
https://academic.oup.com/plphys/advance-article/doi/10.1093/plphys/kiaf559/8307542
4 months ago
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International Society for Plant Low Oxygen Research
Tony Heitkam🌱🔍💚
4 months ago
We are looking for a colleague to join us at RWTH Aachen University: 🌱 Full Professor in Stress Resilience of Plants (W3 tenured) 📌What are we looking for? Someone working with us strategically at the interface of plant biology/ physiology/ resilience
#academicjobs
#facultyjobs
#PlantJobs
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Congratulations to
@charlene-kunaka.bsky.social
and welcome to
#plantscience
Bluesky!
add a skeleton here at some point
4 months ago
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reposted by
International Society for Plant Low Oxygen Research
Association of Applied Biologists
4 months ago
🌿 Charlene Dambire 🌿 A postdoctoral researcher at the University of Nottingham, Charlene's research on plant oxygen sensing through the N-degron pathway is key to unlocking plant stress responses. Beyond science, she is a keen advocate for diversity & gender equality in STEM 🧪
#plantscience
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academic.oup.com/plcell/advan...
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MPK3- and MPK6-mediated phosphorylation of STOP1 triggers its nuclear stabilization to modulate hypoxia responses in Arabidopsis
Competition between phosphorylation and ubiquitination of the transcription factor STOP1 controls its accumulation in the nucleus, thus modulating hypoxia
https://academic.oup.com/plcell/advance-article/doi/10.1093/plcell/koaf257/8301114
4 months ago
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reposted by
International Society for Plant Low Oxygen Research
Frederica Theodoulou
4 months ago
How does leaf age affect flood resilience? 🌿🌊 New preprint from
@rsasidharan.bsky.social
with a little help from us
www.biorxiv.org/content/10.1...
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Leaf-age specific flood resilience in Arabidopsis thaliana is determined by distinct processes contributing to post-submergence recovery
While the molecular mechanisms mediating submergence tolerance have been extensively studied, those underpinning age-dependent resilience remain poorly characterized. In Arabidopsis thaliana, submerge...
https://www.biorxiv.org/content/10.1101/2025.10.16.682766v1
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reposted by
International Society for Plant Low Oxygen Research
Rory Osborne
4 months ago
@djgibbs.bsky.social
and I are advertising a MIBTP PhD project investigating the influence of low oxygen and ethylene signalling on plant-symbiont interactions. Please get in touch via email if you are interested and I can provide further details!
www.birmingham.ac.uk/staff/profil...
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reposted by
International Society for Plant Low Oxygen Research
bioRxiv Plant Bio
4 months ago
Leaf-age specific flood resilience in Arabidopsis thaliana is determined by distinct processes contributing to post-submergence recovery
https://www.biorxiv.org/content/10.1101/2025.10.16.682766v1
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reposted by
International Society for Plant Low Oxygen Research
Dan Gibbs 🌱🧬
4 months ago
We are advertising a PhD project investigating a cellular mechanism that ensures protein quality control during mRNA translation in plants. Please get in touch on here or via email if you are interested and I can provide further details! Lab website:
sites.google.com/site/danielg...
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Daniel Gibbs Lab
Welcome to the lab website of Professor Daniel Gibbs @ University of Birmingham
https://sites.google.com/site/danielgibbslab/
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International Society for Plant Low Oxygen Research
Muhammad Atiq Ashraf
4 months ago
Excited to share that a review close to my Heart is now out in Plant, Cell & Environment.
@isplore.bsky.social
This review synthesises current knowledge of how hormonal crosstalk drives lateral organs growth in different fruit crops under hypoxia and reoxygenation revealing mechanisms.
#Plantscience
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Phytohormone Networks Orchestrating Lateral Organ Adaptations to Hypoxia and Reoxygenation in Fruit Crops
This review synthesises current knowledge of how hormonal crosstalk drives lateral organs growth in different fruit crops under hypoxia and reoxygenation, revealing mechanisms that sustain oxygen upt...
https://onlinelibrary.wiley.com/doi/10.1111/
[email protected]
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onlinelibrary.wiley.com/doi/10.1111/...
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Phytohormone Networks Orchestrating Lateral Organ Adaptations to Hypoxia and Reoxygenation in Fruit Crops
This review synthesises current knowledge of how hormonal crosstalk drives lateral organs growth in different fruit crops under hypoxia and reoxygenation, revealing mechanisms that sustain oxygen upt...
https://onlinelibrary.wiley.com/doi/10.1111/pce.70242
4 months ago
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www.pnas.org/doi/10.1073/...
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Short-term experimental flooding impacts soil biogeochemistry but not aboveground vegetation in a coastal forest | PNAS
Rising sea levels and intensifying storms increase flooding pressure on coastal forests, triggering tree mortality, ecosystem transitions, and chan...
https://www.pnas.org/doi/10.1073/pnas.2511756122
4 months ago
0
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reposted by
International Society for Plant Low Oxygen Research
Journal of Experimental Botany
5 months ago
🚨 SPECIAL ISSUE - CLOSING SOON 🚨 ⛰️🌊 Plants and low oxygen ⛰️🌊 📅 Deadline: 31 October 📄 Got a manuscript? 👉 Contact the JXB office:
bit.ly/JXBissues
#JXBspecialissues
#isplore2025jp
#PlantScience
🧪
@isplore.bsky.social
@sebiology.bsky.social
add a skeleton here at some point
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reposted by
International Society for Plant Low Oxygen Research
Muhammad Atiq Ashraf
5 months ago
Our group work on peach responses to submergence stress is published in 2025 and excited to share this contribution with the low oxygen community.
link.springer.com/article/10.1...
@isplore.bsky.social
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Decoding submergence tolerance in Prunus persica: Integrated transcriptomic and metabolomic acclimations of antioxidant system, cell wall dynamics, and hormonal signaling - Horticulture Advances
Low oxygen stress (hypoxia) induced by submergence significantly impairs respiration in fruit trees, leading to reduced yield and, in extreme cases, tree mortality. While extensive research has focused on the root responses of peach trees to waterlogging, the mechanisms underlying leaf responses to complete submergence remain poorly understood. In this study, both transcriptomic and metabolic approaches were employed to explore the differential submergence tolerance between two peach cultivars: 'Dongxi Xiaoxian' (DX), which exhibits tolerance, and 'Hujing Milu' (HM), which is sensitive. Compared to HM, DX leaves experienced less decline in leaf verdancy, chlorophyll, and carotenoid content under submergence. DX leaves also showed enhanced antioxidant activities of ROS scavengers and reduced levels of H2O2 and MDA, correlating with improved tolerance. Transcriptomic analysis revealed significant alterations in the expression of genes involved in photosynthesis, glycan biosynthesis, and α-linolenic acid metabolism between the two cultivars. Key metabolites, including sugars (sorbitol and sucrose), amino acids (phenylalanine and L-norvaline), cell wall polysaccharides (lignin and pectin), and plant hormones (jasmonic acid and salicylic acid), were identified as critical for DX's superior submergence tolerance. These findings elucidate the mechanisms of peach leaf tolerance to submergence, providing insights into potential strategies for genetic improvement aimed at enhancing hypoxia resistance in fruit trees.
https://link.springer.com/article/10.1007/s44281-024-00058-z
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#ThrowbackThursday
to last week Thursday at
#ISPLORE2025JP
where we took a group picture of our fantastic community. Missing those conferences vibes? Scroll back through the
#ISPLORE2025JP
hashtag for some of the best moments 🌱🌊
5 months ago
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reposted by
International Society for Plant Low Oxygen Research
Muhammad Atiq Ashraf
5 months ago
Inspiring moments with some of the brightest minds at ISPLoRE 2025
#ISPLORE2025JP
@isplore.bsky.social
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reposted by
International Society for Plant Low Oxygen Research
UCPH Section for Freshwater Biology
5 months ago
🎉 Congratulations to Juan and Tobias for receiving the Best Oral Presentation and Best Poster Presentation awards at
#ISPLORE2025JP
! 🌱 Fantastic recognition of their excellent research and presentations — well deserved. Thanks to
@isplore.bsky.social
for supporting early career researchers.
add a skeleton here at some point
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International Society for Plant Low Oxygen Research
UCPH Section for Freshwater Biology
5 months ago
👏 Congratulations to Ole Pedersen on receiving the first Rens Voesenek Award at
#ISPLORE2025JP
! 🌱🌊 We are proud to see his work recognized by the
@isplore.bsky.social
community.
add a skeleton here at some point
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International Society for Plant Low Oxygen Research
Viktoriia Voloboeva
5 months ago
#ISPLORE2025JP
went beyond all expectations and gave us the best experience we could imagine. Huge compliments to the organisers! It was such a pleasure to reconnect with friends, meet new people, and see so much cool science 🌟🥹
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International Society for Plant Low Oxygen Research
Rashmi Sasidharan
5 months ago
#ISPLORE25JP
has been such a fabulous meeting. I got to remember & honor my mentor, watch my PHD twins shine on stage, meet old friends, experience exciting science, and the beauty and hospitality of Japan ❤️❤️❤️
@isplore.bsky.social
@uuplants.bsky.social
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