Sebastien Calvignac-Spencer
@scs22.bsky.social
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Infectious disease ecology and evolution, pathogen genomics, environmental DNA, ancient DNA/RNA
reposted by
Sebastien Calvignac-Spencer
Helmholtz Institute for One Health (HIOH)
18 days ago
New study by the Institut Pasteur de Bangui and HIOH examines CAR
#mpox
outbreaks via genomic
#epidemiology
. High frequencies of independent spillovers highlight the need to strengthen systematic surveillance & identify animal sources to prevent future outbreaks
www.sciencedirect.com/science/arti...
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We were part of another viral aRNA study that was just published. In this work spearheaded by Christian Urban in the lab of Verena Schuenemann, a new protocol was assessed (good for short fragments) and a seventh 1918 flu genome was completely sequenced
bmcbiol.biomedcentral.com/articles/10....
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An ancient influenza genome from Switzerland allows deeper insights into host adaptation during the 1918 flu pandemic in Europe - BMC Biology
Background From 1918 to 1920, the largest influenza A virus (IAV) pandemic known to date spread globally causing between 20 to 100 million deaths. Historical records have captured critical aspects of ...
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-025-02282-z
3 months ago
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We just succeeded in formally linking a specific rodent species - the otherwise charming fire-footed rope squirrel - to the onset of a mpox outbreak in a primate species - sooty mangabeys. Here Kai’s report on the preprint we released yesterday 1/2
add a skeleton here at some point
6 months ago
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reposted by
Sebastien Calvignac-Spencer
Schaufler Lab (GEAR@HIOH)
7 months ago
We are looking for a dedicated replacement to work as a technical assistant.
www.helmholtz-hzi.de/karriere/job...
If you are interested, please send us your complete application documents in accordance with the job advertisement.
@helmholtz-hioh.bsky.social
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Das Helmholtz-Institut für One Health (HIOH) sucht eine_n Technische_n Assistent_in (w/m/d)
Das Helmholtz-Institut für One Health (HIOH) Greifswald ist ein Standort des Helmholtz-Zentrums für Infektionsforschung (HZI). Hier werden die Zusammen...
https://www.helmholtz-hzi.de/karriere/jobportal/job/030-2025-technische-n-assistent-in-w-m-d/
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reposted by
Sebastien Calvignac-Spencer
RESTOREID
8 months ago
🧬 First update from the eDNA lab! 🪰 Extracting mammalian DNA from carrion flies collected in Tanzania for biodiversity studies. A first trial using
@helmholtz-hioh.bsky.social
protocol for the flies collected by
@uantwerpen.bsky.social
+
#Gecolab
Shoutout to
@paulinevanl.bsky.social
! 📸
#eDNA
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reposted by
Sebastien Calvignac-Spencer
Helmholtz Institute for One Health (HIOH)
9 months ago
🚨
#Job
Alert 🚨 Die Bewerbungsfrist für die Position als Institutssekretär:in am HIOH endet bald! 📅 Bewerbungsschluss: 22. Januar. Eine spannende Chance, Teil eines internationalen Forschungsteams in Greifswald zu werden. Mehr Infos:
www.helmholtz-hioh.de/fileadmin/HI...
#JobOpportunity
#OneHealth
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reposted by
Sebastien Calvignac-Spencer
Tulio de Oliveira
8 months ago
Excited to announce the African STARS Fellowship, one of the largest programs in Africa. In partnership with Mastercard Foundation, Institut Pasteur & Stellenbosch University, initial funding of 165 million rands. Press release
ceri.org.za/news/?token=...
Launch 15 Jan, Cape Town, SA
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A very reasonable thread on this (a bit unnecessarily overheated) debate.
add a skeleton here at some point
8 months ago
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Sebastien Calvignac-Spencer
Peter Simmonds
9 months ago
Hi Related to your & the previous post, I looked it up and there are 120 Study Groups (SGs), with collectively more than 900 members. These are expert and typically quite experienced virologists, & should provide a reasonable cross-section of knowledge and expertise. So it's not a mad dictatorship!
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reposted by
Sebastien Calvignac-Spencer
9 months ago
🦠 We are recruiting two 2-year postdocs to work at the intersection of virus genomics and infectious disease.
jobs.rvc.ac.uk/vacancy.aspx...
Please share widely!
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Here the article where the ICTV explains the transition to Latinized binomial species names. I think the rationale is compelling: this change brings coherence, aligning viral taxonomy with that of all other biological entities 1/5
www.microbiologyresearch.org/content/jour...
add a skeleton here at some point
9 months ago
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Sebastien Calvignac-Spencer
Angie Rasmussen
10 months ago
Grateful to
@smritimallapaty.bsky.social
for covering our analysis of host transcriptional infection signatures at the Huanan market! Still not the “smoking raccoon dog” but getting closer…
www.nature.com/articles/d41...
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Sick animals suggest COVID pandemic started in Wuhan market
A preliminary analysis takes a closer look at genomic data collected at the market.
https://www.nature.com/articles/d41586-024-03968-0
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Sebastien Calvignac-Spencer
Martin Kuhlwilm
10 months ago
Out now: How we screened great apes from museum collections to find viruses!
rdcu.be/d1UsZ
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Screening great ape museum specimens for DNA viruses
Scientific Reports - Screening great ape museum specimens for DNA viruses
https://rdcu.be/d1UsZ
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