Abhishek Shrivastava
@shrivastavalab.bsky.social
📤 2139
📥 1944
📝 25
Assistant Professor, Arizona State University Bacterial motility, T9SS, Microbiome
pinned post!
Our new paper in ISME Journal reports that swarms of anaerobic bacteria isolated from the human mouth exhibit mesmerizing flower-like, wave-like, and chrysanthemum firework patterns, via developmental phase transitions, to establish scattered colonies in new region
academic.oup.com/ismej/articl...
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Swarming bacteria exhibit developmental phase transitions to establish scattered colonies in new regions
Abstract. The collective surface motility and swarming behavior of microbes play a crucial role in the formation of polymicrobial communities, shaping ecos
https://academic.oup.com/ismej/article/19/1/wrae263/7942340
about 1 year ago
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reposted by
Abhishek Shrivastava
Sonja-Verena Albers
5 months ago
Happy to share that our story on the bacterial archaellum was published today in
@natmicrobiol.nature.com
www.nature.com/articles/s41...
Congrats to the authors:
@sshamphavi.bsky.social
@loumollat.bsky.social
@mariejoest.bsky.social
Najwa Taib and
@sgribaldo.bsky.social
add a skeleton here at some point
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Our paper on how a conveyor belt-associated protein of T9SS-driven gliding bacteria acts as a molecular switch, reversing T9SS rotation to fine-tune movement - like a smart conveyor or biological snowmobile adapting to changing terrain is out now in
@mbio.bsky.social
journals.asm.org/doi/10.1128/...
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A molecular conveyor belt-associated protein controls the rotational direction of the bacterial type 9 secretion system | mBio
The type 9 secretion system (T9SS) is fundamental to bacterial gliding motility, pathogenesis, and surface colonization. Our findings reveal that the C-terminal region of the conveyor belt-associated ...
https://journals.asm.org/doi/10.1128/mbio.01125-25
8 months ago
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reposted by
Abhishek Shrivastava
Ákos T Kovács
9 months ago
Distinguishing among evolutionary and ecological processes shaping microbiome dynamics
#ISMEJournal
review by Tiffany N Batarseh and
@bkoskella.bsky.social
academic.oup.com/ismej/advanc...
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Distinguishing among evolutionary and ecological processes shaping microbiome dynamics
Abstract. Evolution is defined as the change in allele frequency over time as a result of either neutral processes, such as genetic drift, or as an adaptiv
https://academic.oup.com/ismej/advance-article/doi/10.1093/ismejo/wraf107/8142313?login=false
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Presenting RABiTPy, a Python package for bacterial tracking that works in a jupyter notebook format for: video/image stack import and processing, AI-based or traditional cell segmentation, cell tracking, trajectory analysis, and downstream plotting
bmcbioinformatics.biomedcentral.com/articles/10....
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RABiTPy: an open-source Python software for rapid, AI-powered bacterial tracking and analysis - BMC Bioinformatics
Bacterial tracking is crucial for understanding the mechanisms governing motility, chemotaxis, cell division, biofilm formation, and pathogenesis. Although modern microscopy and computing have enabled...
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-025-06145-w
9 months ago
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Happy to share that a study led by @ShahLab_Enzymes and our joint PhD student Pavani Dadi, where multiple neuromodulatory compounds are reported to be produced by an evolved enzyme from the gut microbe Bacteroides fragilis is now online
www.cell.com/iscience/ful...
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Synthesis of versatile neuromodulatory molecules by a gut microbial glutamate decarboxylase
Biochemistry; Molecular neuroscience; Microbiology
https://www.cell.com/iscience/fulltext/S2589-0042(25)00550-4
10 months ago
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Congratulations to our 2nd year PhD student
@samsen06.bsky.social
for winning a Poster Award for Innovation in Environmental Solutions @ASUBiodesign annual retreat 👏🎊🥳
10 months ago
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Our new paper in ISME Journal reports that swarms of anaerobic bacteria isolated from the human mouth exhibit mesmerizing flower-like, wave-like, and chrysanthemum firework patterns, via developmental phase transitions, to establish scattered colonies in new region
academic.oup.com/ismej/articl...
loading . . .
Swarming bacteria exhibit developmental phase transitions to establish scattered colonies in new regions
Abstract. The collective surface motility and swarming behavior of microbes play a crucial role in the formation of polymicrobial communities, shaping ecos
https://academic.oup.com/ismej/article/19/1/wrae263/7942340
about 1 year ago
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My PhD student, Emma Henderson, received the Howard C. Berg Award for an outstanding talk on motility by a young investigator at the BLAST meeting
#proudpi
#blastmeeting2025
@asuSOLS @ASUBiodesign
about 1 year ago
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Motile bacterial zorbs demonstrate one of the most fascinating collective migration strategies I have ever encountered. Our lab's postdoc, Jitendra Gosai, gave an excellent talk on the sensory control of zorbs at the BLAST conference.
about 1 year ago
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Emma Henderson, a 4th year PhD student from our lab gave a cool talk about a paper that we are currently writing..proud PI moment here 😊
#blastmeeting2025
about 1 year ago
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Our work on motility genes in the human oral microbiota is now published in @JournalSpectrum. This started as an undergraduate research project of the fantastic 1st author Sofia Rocha and it motivated her to continue as a PhD student 😊
journals.asm.org/doi/10.1128/...
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The prevalence of motility-related genes within the human oral microbiota | Microbiology Spectrum
The human oral microbiota has been extensively studied, and many of the isolated bacteria have genome sequences stored on the human oral microbiome database (eHOMD). Spatial distribution and polymicro...
https://journals.asm.org/doi/10.1128/spectrum.01264-24
about 1 year ago
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reposted by
Abhishek Shrivastava
Hannah Reich
about 1 year ago
Wild & weird. Defs stashing away for my
#CellBio
course next semester!
add a skeleton here at some point
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reposted by
Abhishek Shrivastava
Emily Tucker
about 1 year ago
If you haven’t seen it yet, here’s a searchable list of 9000+ starter packs if you’d like find other folks:
blueskydirectory.com/starter-pack...
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All - Bluesky Directory
A curated collection of all things relating to the Blue Sky social media platform.
https://blueskydirectory.com/starter-packs/all
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Looking for a microbiology starter pack? Thanks to
@souvik-uthealth.bsky.social
for creating one. Please nominate yourself and add fellow microbiologists..cheers!
go.bsky.app/QgSQHJ9
add a skeleton here at some point
about 1 year ago
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