HiMaLAYAS: enrichment-based annotation of hierarchically clustered matrices https://www.biorxiv.org/content/10.64898/2026.02.11.705303v1

High-Resolution 3D Histology of the Murine Kidney Using Synchrotron X-Ray Micro-CT https://www.biorxiv.org/content/10.64898/2026.02.11.705367v1

A mechanistic model of protein kinase A dynamics under pro- and anti-nociceptive inputs https://www.biorxiv.org/content/10.64898/2026.02.12.705506v1

xTracer: Integrating chromatogram and mobiligram correlations for untargeted peptide identification in SLIM-based PAMAF data https://www.biorxiv.org/content/10.64898/2026.02.11.705440v1

Machine learning-guided spatial omics for tissue-scale discovery of cell-type-specific architectures https://www.biorxiv.org/content/10.64898/2026.02.12.705598v1

Fusion-driven post-transcriptional network orchestrates ferroptosis resistance, dormancy, and immune remodeling in PRCC-TFE3 renal cell carcinoma https://www.biorxiv.org/content/10.64898/2026.02.12.692412v1

Cell cycle-dependent protein dynamics in budding yeast resolved by deconvolution of bulk proteomics https://www.biorxiv.org/content/10.64898/2026.02.12.705502v1

MNS induces antiviral protection and suppresses inflammation https://www.biorxiv.org/content/10.64898/2026.02.11.705318v1

datadrivenhypothesis.org: A resource for metabolic gene discovery through integrated pathway co-essentiality mapping https://www.biorxiv.org/content/10.64898/2026.02.11.705287v1

Ribosome profiling reveals extensive translational alterations in steatohepatitis-associated hepatocellular carcinoma https://www.biorxiv.org/content/10.64898/2026.02.11.705272v1

Thermodynamic scaling of canine aging and reversible clock deceleration by a reverse transcriptase inhibitor https://www.biorxiv.org/content/10.64898/2026.02.10.705136v1

Multi-omics and biophysical phosphoproteomics upon BRAF inhibition uncover functional networks of BRAFV600E-driven signaling https://www.biorxiv.org/content/10.64898/2026.02.09.704793v1

Existence of Causation without Correlation in Transcriptional Networks https://www.biorxiv.org/content/10.64898/2026.02.09.704821v1

Analysis of Combinatorial Knockout CRISPR screens with GRAPE: Genetic interaction Regression Analysis of Pairwise Effects https://www.biorxiv.org/content/10.64898/2026.02.09.704894v1

Assessing extracellular vesicle proteins as predictive biomarkers for developing type 1 diabetes https://www.biorxiv.org/content/10.64898/2026.02.06.703600v1

Systems level phosphoproteomics reveals CAMKK2 driven kinase signaling underlying malignant phenotypes in gastric cancer https://www.biorxiv.org/content/10.64898/2026.02.06.704339v1

Emergent Threshold Dynamics in Unified Metabolic-Regulatory Models: Achieving Spontaneous Homeostasis Through Bidirectional ATP-Pathway Coupling https://www.biorxiv.org/content/10.64898/2026.02.06.704333v1

Questioning the G2 phase in the budding yeast cell cycle with a qualitative and possibilistic model https://www.biorxiv.org/content/10.64898/2026.02.06.704310v1

Topological Entropy Correlates with the Predictive Power of Multiplexed Ensemble Reservoir Computing https://www.biorxiv.org/content/10.64898/2026.02.04.703839v1

Understanding Iron and Oxidative Stress Response in Escherichia coli Using Multi-phenotype and Ensemble Models https://www.biorxiv.org/content/10.64898/2026.02.04.703689v1

Opposing range-dependent interactions create complex spatial patterns of antibiotic tolerance in multispecies biofilms https://www.biorxiv.org/content/10.64898/2026.02.04.703747v1

PTMOverlay: A Proteomic Tool to Visualize Post-Translational Modifications Across Evolution https://www.biorxiv.org/content/10.64898/2026.02.03.703592v1

Whole-body single-cell atlas of an adult vertebrate in homeostasis and regeneration https://www.biorxiv.org/content/10.64898/2026.02.03.703562v1

Hierarchical organization in sparse gene regulatory networks shapes structural coherence and emergent regulatory coordination https://www.biorxiv.org/content/10.64898/2026.02.04.703680v1

Prey-specific toxins provide broad venom activity in cephalopods https://www.biorxiv.org/content/10.64898/2026.02.02.703354v1

Selective Glucocorticoid Receptor Modulators of Immune Checkpoint Function https://www.biorxiv.org/content/10.64898/2026.02.02.703046v1

AbNovoBench: a resource and benchmarking platform for monoclonal antibody de novo sequencing https://www.biorxiv.org/content/10.64898/2026.02.02.703105v1

Early detection of sudden transitions in Notch signalling https://www.biorxiv.org/content/10.64898/2026.02.01.703083v1

A Functional Metabolomics Framework to Track Microbiome Drug Metabolism https://www.biorxiv.org/content/10.64898/2026.01.30.702925v1

Activities of aqueous extract of Tamarindus indica on phenylhydrazine-induced hematopathological changes in anemic male wistar rats https://www.biorxiv.org/content/10.64898/2026.01.30.702729v1

Why we age: the four process model https://www.biorxiv.org/content/10.64898/2026.01.30.701154v1

OrthoGather: a local platform for orthology-based proteome and proteomics comparisons and Gene Ontology enrichment https://www.biorxiv.org/content/10.64898/2026.01.30.702851v1

Molecular pixelation of the CAR T cell surface proteome https://www.biorxiv.org/content/10.64898/2026.01.30.702970v1

TwinCell: Large Causal Cell Model for Reliable and Interpretable Therapeutic Target Prioritisation https://www.biorxiv.org/content/10.64898/2026.01.29.702072v1

Systems-level analysis identifies IRF6 as an inhibitor of epithelial-mesenchymal transition https://www.biorxiv.org/content/10.64898/2026.01.31.702311v1

Decades of dreams coming true: capillary zone electrophoresis-mass spectrometry for reproducible multi-level proteomics https://www.biorxiv.org/content/10.64898/2026.01.28.702308v1

An adaptive multi-strategy metaheuristic for robust model calibration in large-scale systems biology https://www.biorxiv.org/content/10.64898/2026.01.27.701977v1

Gut and Glomerular Barriers Determine Nanoplastic Fate and Systemic Impact https://www.biorxiv.org/content/10.64898/2026.01.28.699663v1

KGBN: Augmenting and optimizing logical gene regulatory networks using knowledge graphs https://www.biorxiv.org/content/10.64898/2026.01.29.702644v1

A Chemical-Genetic Interaction Matrix Reveals Drug Mechanism and Genetic Architecture https://www.biorxiv.org/content/10.64898/2026.01.28.701823v1

A Meta-Analysis of 515 Human Proteomes Defines the Core Composition and Contaminants of Plasma Extracellular Vesicles isolates https://www.biorxiv.org/content/10.64898/2026.01.28.702342v1

FLARE: Fine-grained Learning for Alignment of spectra-molecule REpresentation Enhances Metabolite Annotation https://www.biorxiv.org/content/10.64898/2026.01.27.702086v1

Metabolic modeling and functional genomics reveal taxa and host gene interactions in colorectal cancer https://www.biorxiv.org/content/10.64898/2026.01.26.700635v1

EXOSC3 G191 Variants Trigger System-Wide Recalibration of RNA Processing Machinery https://www.biorxiv.org/content/10.64898/2026.01.26.701775v1

A network analysis for the identification of gene modules in the transcriptome during Nicotiana benthamiana interfamily grafting https://www.biorxiv.org/content/10.64898/2026.01.26.701652v1

Conformalized Multiview Learning https://www.biorxiv.org/content/10.64898/2026.01.22.700165v1

Molecular atlas of key food odorants reveals structured aroma organization and enables generative aroma design https://www.biorxiv.org/content/10.64898/2026.01.21.700072v1

Spatiotemporal 4D Whole-cell Modeling of a Minimal Autotroph Reveals Central Carbon Metabolism Regulated Locally by Protein Megacomplexes via Post-translational Modifications under Light Disturbance https://www.biorxiv.org/content/10.64898/2026.01.21.700212v1

Understanding Coral Health from Reactor Engineering Perspective: Multiphysics Modeling of Coral - Environment Interactions https://www.biorxiv.org/content/10.64898/2026.01.21.700759v1

Longitudinal Proteomics Analysis of Cerebrospinal Fluid in Survivors of Childhood Acute Lymphoblastic Leukemia https://www.biorxiv.org/content/10.64898/2026.01.22.701141v1