Vojtěch Čermák
@vojta-ce.bsky.social
📤 42
📥 71
📝 3
Postdoc
@sciencecharles.bsky.social
interested in plant epigenetics.
reposted by
Vojtěch Čermák
Phil Ewels
21 days ago
My talk from the
#NextflowSummit
is on YouTube!
youtu.be/LbA_d4oOpDQ
I talked about my recent odyssey with AI-written software, including
#RustQC
,
rewrites.bio
, Trim Galore and a FastQC rust rewrite 👀 This was honestly one of my favourite talks to date. I hope it's interesting for folks 😊
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Phil Ewels: Bioinformatics in the agentic age: Practical tips learnt from RustQC and rewrites.bio
YouTube video by Nextflow
https://youtu.be/LbA_d4oOpDQ
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reposted by
Vojtěch Čermák
Tomáš Kašpar
2 months ago
We are thrilled to share our latest work uncovering a completely novel pathway in plants, where Pol II elongation factor SPT6L recruits AGO4 to guide mRNA methylation 🌿🔬
www.biorxiv.org/content/10.6...
#PlantSci
#Epigenetics
#RNA
#Preprint
#epitranscriptomics
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https://www.biorxiv.org/content/10.64898/2026.03.25.714125v1
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Our new preprint on how in plants ARGONAUT 4 controls RNA cytosine methylation (yes RNA!) which then prevents premature transcription termination
#PlantScience
#Epitranscriptome
#siRNAs
add a skeleton here at some point
2 months ago
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reposted by
Vojtěch Čermák
Clément Lafon Placette
about 1 year ago
Hello BlueSky! Super excited that this work is out thanks to a great team work with Nélida Padilla-Garcia as lead author! We looked at what shaped the purging and fixation of TEs in populations across Arabidopsis lyrata species range. Short answer: the usual suspects, but also genomic imprinting!
add a skeleton here at some point
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reposted by
Vojtěch Čermák
Randall Munroe
about 1 year ago
Lungfish
xkcd.com/3064
96
11883
1395
reposted by
Vojtěch Čermák
Martin Kovacik
over 1 year ago
We would like to invite you to the Czech Plant Nucleus Workshop 2025. Prague, Czech Republic, from May 26 to 27, 2025. Topic: Structural and functional genomics, Genome stability, Epigenetics, Reproduction, Genome editing. See more at:
olomouc.ueb.cas.cz/cpnw
#CPNW2025
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