phyloseminar.org
@phyloseminar.bsky.social
📤 373
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A free online seminar about phylogenetics.
Trevor Graham (Institute for Cancer Research, London) will be speaking in 24 hours on "Quantitative measurement of cancer evolutionary history from single-sample bulk DNA methylation data"
www.youtube.com/watch?v=8shM...
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Phyloseminar #153: Trevor Graham (Institute for Cancer Research, London)
Quantitative measurement of cancer evolutionary history from single-sample bulk DNA methylation data Cancers evolve. Current methods to measure evolutionary dynamics rely on genome sequencing of…
https://www.youtube.com/watch?v=8shMgc0DyyM&ab_channel=phyloseminar.org
about 1 month ago
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Next talk: Trevor Graham (Institute for Cancer Research, London) on "Quantitative measurement of cancer evolutionary history from single-sample bulk DNA methylation data" Monday, November 24 at 9:00 AM PST.
2 months ago
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Ben Raphael (Princeton) will be speaking in 24 hours on "Tumor Evolution over Space and Time"
www.youtube.com/watch?v=j19t...
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Phyloseminar #152: Ben Raphael (Princeton)
Tumor Evolution over Space and Time Cancer is the result of an evolutionary process where genomic mutations and epigenetic alterations accumulate in cells that form a tumor. Modern single-cell and…
https://www.youtube.com/watch?v=j19tV9eM_do&ab_channel=phyloseminar.org
2 months ago
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Next talk: Ben Raphael (Princeton) on "Tumor Evolution over Space and Time" Monday, October 20 at 9:00 AM PDT.
3 months ago
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Niko Beerenwinkel (ETH Zurich) will be speaking in 24 hours on "Modeling tumor progression from single-cell sequencing data." Link:
www.youtube.com/watch?v=IVR7...
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Phyloseminar #151: Niko Beerenwinkel (ETH Zurich)
Modeling tumor progression from single-cell sequencing data Cancer progression is a somatic evolutionary process characterized by the accumulation of genetic alterations and responsible for tumor…
https://www.youtube.com/watch?v=IVR7YYHpJMI&ab_channel=phyloseminar.org
3 months ago
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The next 3 talks will be on the intersection of phylogenetics and cancer research. First talk: Niko Beerenwinkel (ETH Zurich) on "Modeling tumor progression from single-cell sequencing data." Tuesday, September 16 at 9:00 AM PDT.
4 months ago
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Arianna Miles-Jay (Michigan Department of Health and Human Services) will be speaking in 24 hours on "Applying phylogenetics in public health: Past, present, and potential for the future." Link:
www.youtube.com/watch?v=bMqj...
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Phyloseminar #150: Arianna Miles-Jay (Michigan Department of Health and Human Services)
Applying phylogenetics in public health: Past, present, and potential for the futureWith the rapid growth of pathogen genomics in public health comes the inc...
https://www.youtube.com/watch?v=bMqjne9rcUs
5 months ago
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Next talk: Arianna Miles-Jay (Michigan Department of Health and Human Services) on "Applying phylogenetics in public health: Past, present, and potential for the future." Tuesday, August 12, 2025 at 9:00 AM PDT
6 months ago
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Alli Black (Washington State Department of Health) will be speaking in 24 hours on "Practicing the theory: Applying genomic epidemiology to guide public health action" Link:
www.youtube.com/watch?v=D__w...
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Phyloseminar #149: Alli Black (Washington State Department of Health)
Practicing the theory: Applying genomic epidemiology to guide public health action
https://www.youtube.com/watch?v=D__wFAj7ZT0
6 months ago
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Next talk: Alli Black (Washington State Department of Health) on "Practicing the theory: Applying genomic epidemiology to guide public health action." Tuesday, July 15 at 9:00 AM PDT.
6 months ago
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Henry Kunerth (Minnesota Department of Health) will be speaking in 24 hours on "Genomic Surveillance of Human Respiratory Syncytial Virus in Minnesota – Statewide Efforts, Global Impacts." Link:
www.youtube.com/watch?v=e97k...
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Phyloseminar #148: Henry Kunerth (Minnesota Department of Health)
Genomic Surveillance of Human Respiratory Syncytial Virus in Minnesota – Statewide Efforts, Global ImpactsOver the past two respiratory seasons, we’ve succes...
https://www.youtube.com/watch?v=e97k29hPlTU
7 months ago
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Next we will have a trio of talks on public heath. Henry Kunerth (Minnesota Department of Health) will start things off with a talk on "Genomic Surveillance of Human Respiratory Syncytial Virus in Minnesota – Statewide Efforts, Global Impacts" Tuesday, June 17 at 9:00 AM PDT.
7 months ago
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Antoine Koehl (UC Berkeley) will be speaking on "Deep Models of Protein Evolution" in 24 hours. Link:
www.youtube.com/watch?v=SgZv...
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Phyloseminar #147: Antoine Koehl (UC Berkeley)
Deep Models of Protein EvolutionModels of protein evolution seek to quantify how proteins evolve over time while experiencing intricate constraints and adapt...
https://www.youtube.com/watch?v=SgZv0lEKvZ0
7 months ago
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Next talk: Antoine Koehl (UC Berkeley) on "Deep Models of Protein Evolution" Tuesday, May 27 at 9:00 AM PDT
7 months ago
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Pierre Barrat-Charlaix (Politecnico di Torino) will be speaking on "Reconstruction of ancestral protein sequences using autoregressive generative models" in 24 hours. Link:
www.youtube.com/watch?v=-wqg...
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Phyloseminar #146: Pierre Barrat-Charlaix (Politecnico di Torino)
Reconstruction of ancestral protein sequences using autoregressive generative modelsAncestral sequence reconstruction (ASR) is an important tool to understan...
https://www.youtube.com/watch?v=-wqgE4YRLP0
7 months ago
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This talk has been moved 24 hours and 30 minutes later, to Wednesday, May 21, 2025 at 9:30 AM PDT.
bsky.app/profile/phyl...
add a skeleton here at some point
8 months ago
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Next talk: Pierre Barrat-Charlaix (Politecnico di Torino) on "Reconstruction of ancestral protein sequences using autoregressive generative models" Tuesday, May 20 at 9:00 AM PDT
8 months ago
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Faruck Morcos (UT Dallas) will be speaking on "Modeling sequence evolution by learning epistatic terms from protein families" in 24 hours. Link:
www.youtube.com/watch?v=gpZ_...
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Phyloseminar #145: Faruck Morcos (UT Dallas)
Modeling sequence evolution by learning epistatic terms from protein familiesThe use of coevolutionary information, i.e. the knowledge of amino acid or nucle...
https://www.youtube.com/watch?v=gpZ_p71lAdE
8 months ago
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Next talk: Faruck Morcos (UT Dallas) on "Modeling sequence evolution by learning epistatic terms from protein families" Tuesday, April 29, 2025 at 9:00 AM PDT
9 months ago
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This talk has been postponed until May 27th.
bsky.app/profile/did:...
add a skeleton here at some point
9 months ago
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Next we will have a trio of talks on next-generation sequence evolution models. Antoine Koehl
@antoinekoehl.bsky.social
(UC Berkeley) will start things off with a talk "Deep Models of Protein Evolution" on Tuesday, April 1 at 9:00 AM PDT.
10 months ago
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Qianying Lin (Los Alamos) will be speaking on "Segment trees can not identify viral genomic reassortment" in 24 hours.
buff.ly/4hV1WFh
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Phyloseminar #144: Qianying Lin (Los Alamos)
Segment trees can not identify viral genomic reassortmentReassortment is an evolutionary process common in viruses with segmented genomes. These viruses can ...
https://buff.ly/4hV1WFh
10 months ago
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Next talk: Qianying Lin (Los Alamos) on "Segment trees can not identify viral genomic reassortment" Wednesday, March 12 at 9:00 AM PDT
11 months ago
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Our site appears to be down, but we are casting Aaron King's seminar at
https://buff.ly/3QeJb3Z
now!
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Phyloseminar #143: Aaron King (Michigan)
Phylodynamics via Markov genealogy processes (2/2)Phylodynamic inference allows us to extract information on determinants of epidemic dynamics from sampled p...
https://buff.ly/3QeJb3Z
11 months ago
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The second talk from Aaron King (Michigan) on "Phylodynamics via Markov genealogy processes" will be starting in 24 hours.
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Phyloseminar #143: Aaron King (Michigan)
Phylodynamics via Markov genealogy processes (2/2)Phylodynamic inference allows us to extract information on determinants of epidemic dynamics from sampled p...
https://buff.ly/4g2hMwG
11 months ago
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Aaron King (Michigan) will be giving the second of two talks on "Phylodynamics via Markov genealogy processes" on Tuesday, February 11, 2025 at 9:00 AM PST.
12 months ago
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The first talk from Aaron King (Michigan) on "Phylodynamics via Markov genealogy processes" will be starting in 10 minutes.
www.youtube.com/watch?v=AQLr...
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Phyloseminar #142: Aaron King (Michigan)
YouTube video by phyloseminar.org
https://www.youtube.com/watch?v=AQLrU7fGtQA&ab_channel=phyloseminar.org
12 months ago
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Next, Aaron King (Michigan) will be giving two talks on "Phylodynamics via Markov genealogy processes". The first will be on Tuesday, January 14, 2025 at 9:00 AM PST.
about 1 year ago
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We passed the 15 year mark! Planning the 141st seminar now. Thanks to all the speakers, and all of you for getting the word out!
about 1 year ago
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We are here! All future seminar announcements will be posted here.
about 1 year ago
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you reached the end!!
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