Tomas Bruna
@tomasbruna.bsky.social
๐ค 179
๐ฅ 22
๐ 1
Genome Data Scientist @ DOE Joint Genome Institute
reposted by
Tomas Bruna
Katharina Hoff
16 days ago
With help of international colleagues at
@jgi.doe.gov
,
@oregonstate.edu
, and
@stockholm-uni.bsky.social
, we are relasing new parameters for Tiberius. Thx to Lars Gabriel, @tomasbruna.bsky.social, Samuel Talbot,
@chriswheat.bsky.social
,
@masta.bsky.social
- and many others.
github.com/Gaius-August...
loading . . .
Release v1.1.7 ยท Gaius-Augustus/Tiberius
โ ๏ธ New Models available: Diatoms Eudicotyledons Lepidoptera Monocotyledonae Mucoromycota Saccharomycota Sordariomycota Several bugfixes.
https://github.com/Gaius-Augustus/Tiberius/releases/tag/v1.1.7
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Big thanks to
@axelvisel.bsky.social
for sharing! For full consideration, please apply by September 2.
add a skeleton here at some point
3 months ago
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reposted by
Tomas Bruna
John Lovell
3 months ago
Determining presence-absence variation (PAV) across reference genomes is a major goal of pangenome analysis. It turns out that A LOT of gene PAV is due to methodological artifacts. We explore the causes of this in soybean and cotton datasets in our recent preprint:
www.biorxiv.org/content/10.1...
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