Alright, it's still very much a work in progress, but you can now run resgen locally to view data that's on your machine without uploading to resgen.io. docs.resgen.io/local/runnin...

Small new feature: the ability to collapse tracks to free up space. Thanks to Johan Gibcus for the suggestion!

Did you know oxbow powers resgen? We use it to load bam and bigwig tiles. Great library!

Small but satisfying update over the weekend to (mostly) sync the styling between the main page and docs page:

Pssst 🤫... you can also try this live with @genomeinabottle.bsky.social data here: resgen.io/paper-data/Z...

New year, new home page! Trying to make it easier to get to recently viewed projects and views. Access via the "home" button on the top menu bar when logged in. Also added a small news feed to highlight recent updates you may or may not have noticed. Happy new year!!

I wonder what it would take to search for a single sequence that may vary from 100 - 10k nt in length across hundreds of vertebrate genomes in less than a second 🤔. Surely the index needs to be loaded into memory. Minimap2 seems promising or an online version of BWA?

Pileup support is shaping up to be both performant and beautiful thanks to the Rust powered Oxbow package: github.com/abdenlab/oxb... Big shout out to @nvictus.bsky.social and @manzt.sh for implementing key features like buffering and file-like pointer support!

Got a version of paired-end read pileups out. The aesthetics are nice but the layout algorithm needs some work. Still not quite ready for prime time. Nevertheless, here's a link to try it out with data from a Gorilla genome from Yoo et al. 2024 (Eichler lab). resgen.io/paper-data/Y...

😍😍

Big update over the weekend: datasets can now be organized into folders! Also, the default ordering for projects is by the last time they were opened. Soon to come is an option to select how they are ordered.

Thinking of making the tilesets list support nesting, like a file browser 🤔. Tags and descriptions wouldn't change.