Alessio Buccino
@alessio-buccino.bsky.social
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Electrophysiology tools, open source software, spike sorting, HD-MEAs and neuroengineering 🧠
For all
#electrophysiology
folks! We just released and end-to-end spike sorting pipeline for large scale ephys! It's based on Nextflow and SpikeInterface, fully reproducible and parallelized. Check out the preprint here:
www.biorxiv.org/content/10.1...
add a skeleton here at some point
15 days ago
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reposted by
Alessio Buccino
Neurodata Without Borders
about 1 month ago
At
#SfN25
? Catch Alessio Buccino at the NWB/DANDI booth #3835 at 2pm today for a demo of
@spikeinterface.bsky.social
, a library for building full analysis pipelines for extracellular recordings: pre-processing, spike sorting, curation, visualization, & more. Select from 10+ sorters or run them all!
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reposted by
Alessio Buccino
International Brain Laboratory
4 months ago
Two flagship papers from the International Brain Laboratory, now out in @Nature.com: 🧠 Brain-wide map of neural activity during complex behaviour:
doi.org/10.1038/s41586-025-09235-0
🧠 Brain-wide representations of prior information in mouse decision-making:
doi.org/10.1038/s41586-025-09226-1
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New SpikeInterface version is out!
add a skeleton here at some point
5 months ago
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Last week, Samuel Garcia and I gave a public webinar on the SpikeInterface-GUI, a powerful tool for spike sorting visualization and curation.
github.com/SpikeInterfa...
If you missed it, you can check out the viedo on the
@spikeinterface.bsky.social
youtube channel:
www.youtube.com/watch?v=oZl8...
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SpikeInterface-GUI webinar - 26/06/25
YouTube video by Spikeinterface
https://www.youtube.com/watch?v=oZl8sq3n9tg&t=7s
6 months ago
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reposted by
Alessio Buccino
SpikeInterface
7 months ago
#ecephys
#spikesorting
Hi all! 📣 We are giving a webinar on the SpikeInterface-GUI on Jun 26th, 6pm CET! The GUI has a desktop and webapp implementation and can be used instead of Phy. If you're interested, please register here:
docs.google.com/forms/d/e/1F...
Happy spike sorting!
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https://spikeinterface.readthedocs.io/en/latest/re..
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reposted by
Alessio Buccino
SpikeInterface
11 months ago
#ecephys
#spikesorting
Hi all! 📣📣📣📣📣📣📣 We just released SpikeInterface v0.102.0! List of major changes and a list of all PRs in the release notes here:
spikeinterface.readthedocs.io/en/latest/re...
You can update your current version with: >>> pip install -U spikeinterface Happy spike sorting!
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SpikeInterface 0.102.0 release notes — SpikeInterface documentation
https://spikeinterface.readthedocs.io/en/latest/releases/0.102.0.html
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