@mariuslange.bsky.social
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Happy to share CellAnnotator, a lightweight Python package to query OpenAI models for initial cell type annotations:
github.com/quadbio/cell...
Inspired by ideas in
www.nature.com/articles/s41...
and
github.com/VPetukhov/GP...
, implemented as an scVerse ecosystem package with docs and tutorials.
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GitHub - quadbio/cell-annotator: Automatically annotate cell types, consistently across samples.
Automatically annotate cell types, consistently across samples. - quadbio/cell-annotator
https://github.com/quadbio/cell-annotator
6 months ago
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Excited to see moscot out in Nature! This was a great collaborative effort, thanks to everyone involved for making this project a success!
add a skeleton here at some point
8 months ago
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On my first day of joining bluesky, our CellRank project is officially awarded the Helmholtz Software award for scientific originality! This is a great honor for the CellRank dev team, including Philipp Weiler, Michal Klein, and myself. Check out
cellrank.org
to learn more.
add a skeleton here at some point
10 months ago
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you reached the end!!
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